RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 RAPGEFL1Q9UHV5 662 aa28.66■■■□□ 2.18
CTCF-203ENST00000566078 MMACHCQ9Y4U1 282 aa28.66■■■□□ 2.18
CTCF-203ENST00000566078 RIF1Q5UIP0 2472 aaKnown RBP28.66■■■□□ 2.18
CTCF-203ENST00000566078 ARPC2O15144 300 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 SLC35E2P0CK97 266 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 CDK4P11802 303 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 MINDY4Q4G0A6 757 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 NKAIN1Q4KMZ8 207 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 VWA2Q5GFL6 755 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 ZNF385CQ66K41 422 aaPredicted RBP28.65■■■□□ 2.18
CTCF-203ENST00000566078 MED25Q71SY5 747 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 DHFR2Q86XF0 187 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 MICU2Q8IYU8 434 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 TNIP2Q8NFZ5 429 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 SLC35G5Q96KT7 338 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 C3orf14Q9HBI5 128 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 CTSFQ9UBX1 484 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 SNX13Q9Y5W8 968 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 SPAARA0A1B0GVQ0 90 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 ELOVL7A1L3X0 281 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 EMC8O43402 210 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 OR10H2O60403 315 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 ETFAP13804 333 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 NCK1P16333 377 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 ZNF28P17035 718 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 RORAP35398 523 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 ETV5P41161 510 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 MAPK10P53779 464 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 DCDP81605 110 aaKnown RBP28.65■■■□□ 2.18
CTCF-203ENST00000566078 PRR5P85299 388 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 FADDQ13158 208 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 FXNQ16595 210 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 ZNF628Q5EBL2 1059 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 CPZQ66K79 652 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 CEACAM20Q6UY09 585 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 CYP2R1Q6VVX0 501 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 OR56A1Q8NGH5 318 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 PPWD1Q96BP3 646 aaKnown RBP28.65■■■□□ 2.18
CTCF-203ENST00000566078 ALOXE3Q9BYJ1 711 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 NECTIN3Q9NQS3 549 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 BCAP29Q9UHQ4 241 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 CLDN16Q9Y5I7 305 aa28.65■■■□□ 2.18
CTCF-203ENST00000566078 GSTA4O15217 222 aa28.64■■■□□ 2.18
CTCF-203ENST00000566078 FTH1P19P0C7X4 201 aa28.64■■■□□ 2.18
CTCF-203ENST00000566078 ATP6V1B2P21281 511 aa28.64■■■□□ 2.18
CTCF-203ENST00000566078 PRKAG1P54619 331 aa28.64■■■□□ 2.18
CTCF-203ENST00000566078 RPS26P62854 115 aaKnown RBP28.64■■■□□ 2.18
CTCF-203ENST00000566078 OR7G2Q8NG99 324 aa28.64■■■□□ 2.18
CTCF-203ENST00000566078 SPATA9Q9BWV2 254 aa28.64■■■□□ 2.18
CTCF-203ENST00000566078 ANKRA2Q9H9E1 313 aa28.64■■■□□ 2.18
CTCF-203ENST00000566078 ACTR3BQ9P1U1 418 aa28.64■■■□□ 2.18
CTCF-203ENST00000566078 MGRN1O60291 552 aa28.63■■■□□ 2.17
CTCF-203ENST00000566078 KCNK5O95279 499 aa28.63■■■□□ 2.17
CTCF-203ENST00000566078 NUDT7P0C024 238 aa28.63■■■□□ 2.17
CTCF-203ENST00000566078 RAB15P59190 212 aa28.63■■■□□ 2.17
CTCF-203ENST00000566078 NHLH1Q02575 133 aa28.63■■■□□ 2.17
CTCF-203ENST00000566078 BHLHB9Q6PI77 547 aa28.63■■■□□ 2.17
CTCF-203ENST00000566078 QSOX2Q6ZRP7 698 aa28.63■■■□□ 2.17
CTCF-203ENST00000566078 ZZZ3Q8IYH5 903 aa28.63■■■□□ 2.17
CTCF-203ENST00000566078 ST13P4Q8IZP2 240 aaPredicted RBP28.63■■■□□ 2.17
CTCF-203ENST00000566078 NUP43Q8NFH3 380 aa28.63■■■□□ 2.17
CTCF-203ENST00000566078 JADE3Q92613 823 aa28.63■■■□□ 2.17
CTCF-203ENST00000566078 PTCHD1Q96NR3 888 aa28.63■■■□□ 2.17
CTCF-203ENST00000566078 DDX18Q9NVP1 670 aaKnown RBP28.63■■■□□ 2.17
CTCF-203ENST00000566078 MAGEL2Q9UJ55 1249 aa28.63■■■□□ 2.17
CTCF-203ENST00000566078 PLOD2O00469 737 aa28.62■■■□□ 2.17
CTCF-203ENST00000566078 GGT1P19440 569 aa28.62■■■□□ 2.17
CTCF-203ENST00000566078 PRICKLE4Q2TBC4 344 aa28.62■■■□□ 2.17
CTCF-203ENST00000566078 DCAF12Q5T6F0 453 aa28.62■■■□□ 2.17
CTCF-203ENST00000566078 FAM111BQ6SJ93 734 aa28.62■■■□□ 2.17
CTCF-203ENST00000566078 PTOV1Q86YD1 416 aa28.62■■■□□ 2.17
CTCF-203ENST00000566078 PRSS58Q8IYP2 241 aa28.62■■■□□ 2.17
CTCF-203ENST00000566078 ZNF675Q8TD23 568 aa28.62■■■□□ 2.17
CTCF-203ENST00000566078 DOK4Q8TEW6 326 aa28.62■■■□□ 2.17
CTCF-203ENST00000566078 LRGUKQ96M69 825 aa28.62■■■□□ 2.17
CTCF-203ENST00000566078 DGAT2Q96PD7 388 aa28.62■■■□□ 2.17
CTCF-203ENST00000566078 ULBP3Q9BZM4 244 aa28.62■■■□□ 2.17
CTCF-203ENST00000566078 TRIM15Q9C019 465 aa28.62■■■□□ 2.17
CTCF-203ENST00000566078 MAT2BQ9NZL9 334 aa28.62■■■□□ 2.17
CTCF-203ENST00000566078 PISDQ9UG56 409 aa28.62■■■□□ 2.17
CTCF-203ENST00000566078 CCDC187A0A096LP49 1063 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 PMS2P1A4D2B8 440 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 SLITRK5O94991 958 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 JMJD7P0C870 316 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 SERTAD2Q14140 314 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 GCNT6Q5T4J0 391 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 LCN8Q6JVE9 175 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 TNFAIP8L2Q6P589 184 aaPredicted RBP28.61■■■□□ 2.17
CTCF-203ENST00000566078 ERICH5Q6P6B1 374 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 DGAT2L6Q6ZPD8 337 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 STMN2Q93045 179 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 PTGFRNQ9P2B2 879 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 MEN1O00255 615 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 UPK1AO00322 258 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 TNFRSF21O75509 655 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 DKK1O94907 266 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 STT3AP46977 705 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 RHAGQ02094 409 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 OCA2Q04671 838 aa28.61■■■□□ 2.17
CTCF-203ENST00000566078 ADRM1Q16186 407 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms