RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 CLOCKO15516 846 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 B4GAT1O43505 415 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 CDC123O75794 336 aaPredicted RBP5.86□□□□□ -1.47
CHD9-217ENST00000565832 FKBP9O95302 570 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 PROS1P07225 676 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 GNAO1P09471 354 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 VSIG8P0DPA2 414 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 RAP2AP10114 183 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 UMPSP11172 480 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 TDGF1P13385 188 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 UQCRBP14927 111 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 FRKP42685 505 aaPredicted RBP5.86□□□□□ -1.47
CHD9-217ENST00000565832 VLDLRP98155 873 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 CHRNB3Q05901 458 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 RGS1Q08116 209 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 MAPK11Q15759 364 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 SYT16Q17RD7 645 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 SPDYE7PQ495Y7 208 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 FAM98BQ52LJ0 330 aaKnown RBP5.86□□□□□ -1.47
CHD9-217ENST00000565832 WDR45BQ5MNZ6 344 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 LYSMD4Q5XG99 296 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 SLC48A1Q6P1K1 146 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 OGFOD3Q6PK18 319 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 TMEM107Q6UX40 140 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 FKBP9P1Q75LS8 142 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 C17orf82Q86X59 251 aaPredicted RBP5.86□□□□□ -1.47
CHD9-217ENST00000565832 MCATQ8IVS2 390 aaKnown RBP5.86□□□□□ -1.47
CHD9-217ENST00000565832 SULF2Q8IWU5 870 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 SLC35F3Q8IY50 421 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 ZCCHC7Q8N3Z6 543 aaKnown RBP5.86□□□□□ -1.47
CHD9-217ENST00000565832 CSNK1A1LQ8N752 337 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 TMEM105Q8N8V8 129 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 ANKFN1Q8N957 763 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 OR52N2Q8NGI0 321 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 OR9A2Q8NGT5 310 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 NT5CQ8TCD5 201 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 MAGEE2Q8TD90 523 aaPredicted RBP5.86□□□□□ -1.47
CHD9-217ENST00000565832 SLC38A5Q8WUX1 472 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 TMBIM1Q969X1 311 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 PYURFQ96I23 114 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 ZNF681Q96N22 645 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 BBS4Q96RK4 519 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 WFDC6Q9BQY6 131 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 PCED1AQ9H1Q7 454 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 MUC13Q9H3R2 512 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 SEMA6CQ9H3T2 930 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 SMOC1Q9H4F8 434 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 SMURF2Q9HAU4 748 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 VNN3Q9NY84 501 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 TAS2R7Q9NYW3 318 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 KCNE3Q9Y6H6 103 aa5.86□□□□□ -1.47
CHD9-217ENST00000565832 CFAP47Q6ZTR5 3102 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 KNTC1P50748 2209 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 A0A0A6YYC8 382 aaPredicted RBP5.85□□□□□ -1.47
CHD9-217ENST00000565832 I3L1I5 382 aaPredicted RBP5.85□□□□□ -1.47
CHD9-217ENST00000565832 HMGN4O00479 90 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 EI24O14681 340 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 RDH16O75452 317 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 CST1P01037 141 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 LDLRP01130 860 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 RETP07949 1114 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 OR12D1P0DN82 309 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 DRD2P14416 443 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 ZNF23P17027 643 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 ALOX12P18054 663 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 NME2P22392 152 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 ALAS2P22557 587 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 UQCRC2P22695 453 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 CPN2P22792 545 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 RPL3P39023 403 aaKnown RBP5.85□□□□□ -1.47
CHD9-217ENST00000565832 CTSKP43235 329 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 CAPZBP47756 277 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 XKP51811 444 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 MAT1AQ00266 395 aaKnown RBP5.85□□□□□ -1.47
CHD9-217ENST00000565832 EEF1A2Q05639 463 aaKnown RBP5.85□□□□□ -1.47
CHD9-217ENST00000565832 SIGLEC14Q08ET2 396 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 ATP6AP1Q15904 470 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 SYPL1Q16563 259 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 DUSP7Q16829 419 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 ZIK1Q3SY52 487 aaPredicted RBP5.85□□□□□ -1.47
CHD9-217ENST00000565832 C14orf28Q4W4Y0 310 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 TRMT12Q53H54 448 aaKnown RBP5.85□□□□□ -1.47
CHD9-217ENST00000565832 C1orf229Q6ZS94 237 aaPredicted RBP5.85□□□□□ -1.47
CHD9-217ENST00000565832 TMPRSS9Q7Z410 1059 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 TSEN54Q7Z6J9 526 aaKnown RBP5.85□□□□□ -1.47
CHD9-217ENST00000565832 C1orf210Q8IVY1 113 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 TRIML2Q8N7C3 387 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 AMER2Q8N7J2 671 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 C19orf47Q8N9M1 422 aaKnown RBP5.85□□□□□ -1.47
CHD9-217ENST00000565832 TNIP2Q8NFZ5 429 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 XAGE5Q8WWM1 108 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 OR5P2Q8WZ92 322 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 EDAQ92838 391 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 GAL3ST3Q96A11 431 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 ZG16BQ96DA0 208 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 ZBED6CLQ96FA7 236 aaPredicted RBP5.85□□□□□ -1.47
CHD9-217ENST00000565832 C10orf90Q96M02 699 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 CNBD2Q96M20 576 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 CCDC3Q9BQI4 270 aa5.85□□□□□ -1.47
CHD9-217ENST00000565832 NLNQ9BYT8 704 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms