RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 HOXB9P17482 250 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-205ENST00000564899 IL10P22301 178 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 PTPN6P29350 595 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 GPC1P35052 558 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 RORAP35398 523 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 SOAT1P35610 550 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 PGM1P36871 562 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 XKP51811 444 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 SLC7A2P52569 658 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 HBA1P69905 142 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 DUSP2Q05923 314 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 NFATC3Q12968 1075 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 HSPB3Q12988 150 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 SLC13A2Q13183 592 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 GAB1Q13480 694 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 ERV3-1Q14264 604 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 MLC1Q15049 377 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 CEBPEQ15744 281 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 C3orf38Q5JPI3 329 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 COLEC12Q5KU26 742 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 ZNF385CQ66K41 422 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-205ENST00000564899 COX15Q7KZN9 410 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 ZNF551Q7Z340 670 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-205ENST00000564899 ZC3H7AQ8IWR0 971 aaKnown RBP10.4□□□□□ -0.74
SF3B3-205ENST00000564899 MSRB3Q8IXL7 192 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 CCDC116Q8IYX3 515 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 CACTIN-AS1Q8N1I8 211 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 ARHGAP24Q8N264 748 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 LRRC25Q8N386 305 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-205ENST00000564899 GOT1L1Q8NHS2 421 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-205ENST00000564899 SUN3Q8TAQ9 357 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 ZNF681Q96N22 645 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 ZNF578Q96N58 590 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-205ENST00000564899 AMDHD1Q96NU7 426 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 PHF12Q96QT6 1004 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 TAAR9Q96RI9 348 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 ZPBPQ9BS86 351 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 THTPAQ9BU02 230 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 DDA1Q9BW61 102 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 ULBP3Q9BZM4 244 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 SPAG4Q9NPE6 437 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 MKKSQ9NPJ1 570 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-205ENST00000564899 SLC22A11Q9NSA0 550 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 TAS2R9Q9NYW1 312 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 SLC25A37Q9NYZ2 338 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 VAPAQ9P0L0 249 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 ZNF282Q9UDV7 671 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-205ENST00000564899 PRPF19Q9UMS4 504 aaKnown RBP10.4□□□□□ -0.74
SF3B3-205ENST00000564899 PCDHB14Q9Y5E9 798 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 B3GALT1Q9Y5Z6 326 aa10.4□□□□□ -0.74
SF3B3-205ENST00000564899 SPTBP11277 2137 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 CFAP73A6NFT4 308 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 K7ENP7 123 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 MEN1O00255 615 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 CTNSO60931 367 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 BMP10O95393 424 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 ONECUT2O95948 504 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 ZCCHC18P0CG32 403 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 CPMP14384 443 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 AGXTP21549 392 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 SLC6A2P23975 617 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 MPIP34949 423 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 CDK9P50750 372 aaKnown RBP10.39□□□□□ -0.75
SF3B3-205ENST00000564899 HSD17B7P56937 341 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 MTPNP58546 118 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 KCNJ2P63252 427 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 STX4Q12846 297 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 LINC00303Q3SY05 128 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 SPDYE7PQ495Y7 208 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 MINDY4Q4G0A6 757 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 MFSD4BQ5TF39 518 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 BROXQ5VW32 411 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 NANOGP8Q6NSW7 305 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 INO80CQ6PI98 192 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-205ENST00000564899 MED25Q71SY5 747 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 SCUBE1Q8IWY4 988 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 TRIML2Q8N7C3 387 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 OR8J3Q8NGG0 315 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 OR9A2Q8NGT5 310 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 ANKRD9Q96BM1 317 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-205ENST00000564899 AURKBQ96GD4 344 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-205ENST00000564899 LRFN5Q96NI6 719 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 ANKRD27Q96NW4 1050 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 RAB3IPQ96QF0 476 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-205ENST00000564899 CDRT15Q96T59 188 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 SLC35A5Q9BS91 424 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 ASPSCR1Q9BZE9 553 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 TRIM8Q9BZR9 551 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 CXorf36Q9H7Y0 433 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 NANOGQ9H9S0 305 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 POLR1BQ9H9Y6 1135 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 LANCL2Q9NS86 450 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 SEMA3GQ9NS98 782 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 SLC6A13Q9NSD5 602 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 C14orf105Q9NVL8 296 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 CMTM6Q9NX76 183 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 ADA2Q9NZK5 511 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 TMEM181Q9P2C4 612 aa10.39□□□□□ -0.75
SF3B3-205ENST00000564899 IFT80Q9P2H3 777 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-205ENST00000564899 ABCD2Q9UBJ2 740 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms