RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 CLDN22Q8N7P3 220 aa15.46■□□□□ 0.06
LINC00554-201ENST00000564841 NTMT1Q9BV86 223 aa15.46■□□□□ 0.06
LINC00554-201ENST00000564841 PIGUQ9H490 435 aa15.46■□□□□ 0.06
LINC00554-201ENST00000564841 ZNF334Q9HCZ1 680 aaPredicted RBP15.46■□□□□ 0.06
LINC00554-201ENST00000564841 ASIC5Q9NY37 505 aa15.46■□□□□ 0.06
LINC00554-201ENST00000564841 TVP23BQ9NYZ1 205 aa15.46■□□□□ 0.06
LINC00554-201ENST00000564841 TCRBV16S1A1N1A0A5B0 115 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 SH3D21A4FU49 640 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 HNRNPCL2B2RXH8 293 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 TLX2O43763 284 aaPredicted RBP15.45■□□□□ 0.06
LINC00554-201ENST00000564841 TBL1XO60907 577 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 KCNJ13O60928 360 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 PRPS2P11908 318 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 OPRD1P41143 372 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 VEZF1Q14119 521 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 IFI44LQ53G44 452 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 RFLNAQ6ZTI6 216 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 KRT74Q7RTS7 529 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 UBE2Q1Q7Z7E8 422 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 TRIM69Q86WT6 500 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 HS6ST3Q8IZP7 471 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 OR10Z1Q8NGY1 313 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 DNAJB8Q8NHS0 232 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 TRPS1Q9UHF7 1281 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 ATP6V1HQ9UI12 483 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 OARD1Q9Y530 152 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 KCNMB2Q9Y691 235 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 VCANP13611 3396 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 MYOFQ9NZM1 2061 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 A0A1W2PRG6 482 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 GBAP04062 536 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 POU3F2P20265 443 aaPredicted RBP15.45■□□□□ 0.06
LINC00554-201ENST00000564841 GABRR2P28476 465 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 EVX1P49640 407 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 PCDH1Q08174 1060 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 PUDPQ08623 228 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 PUS10Q3MIT2 529 aaKnown RBP15.45■□□□□ 0.06
LINC00554-201ENST00000564841 KLHL12Q53G59 568 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 TRIM43Q96BQ3 446 aaPredicted RBP15.45■□□□□ 0.06
LINC00554-201ENST00000564841 KCNJ15Q99712 375 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 TMED9Q9BVK6 235 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 CHST8Q9H2A9 424 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 TBC1D17Q9HA65 648 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 UBQLN2Q9UHD9 624 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 TBX21Q9UL17 535 aa15.45■□□□□ 0.06
LINC00554-201ENST00000564841 CHD9Q3L8U1 2897 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 A0A1W2PPL8 197 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 ZDHHC11BP0C7U3 371 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 MLLT11Q13015 90 aaPredicted RBP15.44■□□□□ 0.06
LINC00554-201ENST00000564841 ANGPT1Q15389 498 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 SEC23BQ15437 767 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 CLLU1Q5K131 121 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 DDX53Q86TM3 631 aaKnown RBP15.44■□□□□ 0.06
LINC00554-201ENST00000564841 TAGAPQ8N103 731 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 SOSTQ9BQB4 213 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 SAV1Q9H4B6 383 aaPredicted RBP15.44■□□□□ 0.06
LINC00554-201ENST00000564841 RAB23Q9ULC3 237 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 PCDHGB7Q9Y5F8 929 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 PI15O43692 258 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 LGI1O95970 557 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 IGLV3-27P01718 113 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 HLA-DQB1P01920 261 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 PTGER3P43115 390 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 BDKRB1P46663 353 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 DCDC1P59894 354 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 B2MP61769 119 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 SF3A2Q15428 464 aaKnown RBP15.44■□□□□ 0.06
LINC00554-201ENST00000564841 MTFR2Q6P444 385 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 RTL4Q6ZR62 310 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 SERPINA9Q86WD7 417 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 GPALPP1Q8IXQ4 340 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 ATF6BQ99941 703 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 MGME1Q9BQP7 344 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 ATG10Q9H0Y0 220 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 ABCG5Q9H222 651 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 CLEC4MQ9H2X3 399 aaPredicted RBP15.44■□□□□ 0.06
LINC00554-201ENST00000564841 MRPL17Q9NRX2 175 aaKnown RBP15.44■□□□□ 0.06
LINC00554-201ENST00000564841 ARL15Q9NXU5 204 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 SPG21Q9NZD8 308 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 PIKFYVEQ9Y2I7 2098 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 ALPK3Q96L96 1907 aa15.44■□□□□ 0.06
LINC00554-201ENST00000564841 TP53BP1Q12888 1972 aaPredicted RBP15.44■□□□□ 0.06
LINC00554-201ENST00000564841 HRO43593 1189 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 PRKYO43930 277 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 LALBAP00709 142 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 DSTNP60981 165 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 MTAPQ13126 283 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 C1DQ13901 141 aaKnown RBP15.43■□□□□ 0.06
LINC00554-201ENST00000564841 ZNF273Q14593 569 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 LRFN4Q6PJG9 635 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 LAPTM4BQ86VI4 370 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 ADGRG3Q86Y34 549 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 SLC39A11Q8N1S5 342 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 C11orf65Q8NCR3 313 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 WFDC5Q8TCV5 224 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 MYLIPQ8WY64 445 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 HSD17B8Q92506 261 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 WBP1Q96G27 269 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 CXorf58Q96LI9 332 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 SLC29A3Q9BZD2 475 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms