RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 TPBGLP0DKB5 382 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 CPA3P15088 417 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 HLCSP50747 726 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 ERVPABLB-1P60509 514 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 GIT2Q14161 759 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 NFE2L1Q14494 772 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 MEP1BQ16820 701 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 MICAQ29983 383 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 ISXQ2M1V0 245 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 OR4L1Q8NH43 312 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 FAM46BQ96A09 425 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 VSIG2Q96IQ7 327 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 SPATA17Q96L03 361 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 CAPNS2Q96L46 248 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 TIGARQ9NQ88 270 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 IMPAD1Q9NX62 359 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 MRTO4Q9UKD2 239 aaKnown RBP3.3□□□□□ -1.88
UBR1-205ENST00000564540 EXOC7Q9UPT5 735 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 ITM2BQ9Y287 266 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 PLEKHA6Q9Y2H5 1048 aa3.3□□□□□ -1.88
UBR1-205ENST00000564540 FGD5Q6ZNL6 1462 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 A0A0A6YYC8 382 aaPredicted RBP3.29□□□□□ -1.88
UBR1-205ENST00000564540 TMEM129A0AVI4 362 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 A4D1N5 150 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 FAM149AA5PLN7 773 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 I3L1I5 382 aaPredicted RBP3.29□□□□□ -1.88
UBR1-205ENST00000564540 GPAA1O43292 621 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 GOT2P00505 430 aaKnown RBP3.29□□□□□ -1.88
UBR1-205ENST00000564540 IGHV3-9P01782 118 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 MMP10P09238 476 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 CT45A8P0DMV1 189 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 CT45A9P0DMV2 189 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 LAMP1P11279 417 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 ELK1P19419 428 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 KCNK10P57789 538 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 HSPA14Q0VDF9 509 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 KIAA0040Q15053 153 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 RPS6KA1Q15418 735 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 CCDC184Q52MB2 194 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 CT45A2Q5DJT8 189 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 SEL1L2Q5TEA6 688 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 APOOLQ6UXV4 268 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 RAPH1Q70E73 1250 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 TMEM126BQ8IUX1 230 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 OR8H3Q8N146 312 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 ZNF564Q8TBZ8 553 aaPredicted RBP3.29□□□□□ -1.88
UBR1-205ENST00000564540 U2AF1L4Q8WU68 220 aaKnown RBP3.29□□□□□ -1.88
UBR1-205ENST00000564540 UBTD2Q8WUN7 234 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 HAS2Q92819 552 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 EPSTI1Q96J88 318 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 ZNF350Q9GZX5 532 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 SENP1Q9P0U3 644 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 KCNK6Q9Y257 313 aa3.29□□□□□ -1.88
UBR1-205ENST00000564540 TSPAN2O60636 221 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 LYPD3O95274 346 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 TXNDC12O95881 172 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 CD1EP15812 388 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 UCP1P25874 307 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 PRKAR2BP31323 418 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 TRIM23P36406 574 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 PAN3Q58A45 887 aaKnown RBP3.28□□□□□ -1.88
UBR1-205ENST00000564540 DMKNQ6E0U4 476 aaPredicted RBP3.28□□□□□ -1.88
UBR1-205ENST00000564540 RHBDD2Q6NTF9 364 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 STEAP1BQ6NZ63 245 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 C2orf66Q6UXQ4 117 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 MOB2Q70IA6 237 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 PRSS48Q7RTY5 328 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 BIRC7Q96CA5 298 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 CASD1Q96PB1 797 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 TEKT2Q9UIF3 430 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 ABCG2Q9UNQ0 655 aa3.28□□□□□ -1.88
UBR1-205ENST00000564540 C13orf42A0A1B0GVH6 325 aa3.27□□□□□ -1.89
UBR1-205ENST00000564540 SLC15A5A6NIM6 579 aa3.27□□□□□ -1.89
UBR1-205ENST00000564540 DUSP14O95147 198 aaKnown RBP3.27□□□□□ -1.89
UBR1-205ENST00000564540 GJB5O95377 273 aa3.27□□□□□ -1.89
UBR1-205ENST00000564540 GAS8O95995 478 aa3.27□□□□□ -1.89
UBR1-205ENST00000564540 OAS1P00973 400 aaKnown RBP3.27□□□□□ -1.89
UBR1-205ENST00000564540 PRB2P02812 416 aaPredicted RBP3.27□□□□□ -1.89
UBR1-205ENST00000564540 MBL2P11226 248 aaPredicted RBP3.27□□□□□ -1.89
UBR1-205ENST00000564540 SLC7A2P52569 658 aa3.27□□□□□ -1.89
UBR1-205ENST00000564540 CLYBLQ8N0X4 340 aa3.27□□□□□ -1.89
UBR1-205ENST00000564540 GOT1L1Q8NHS2 421 aaPredicted RBP3.27□□□□□ -1.89
UBR1-205ENST00000564540 LINC01006Q8NI28 216 aa3.27□□□□□ -1.89
UBR1-205ENST00000564540 MRPL53Q96EL3 112 aaKnown RBP3.27□□□□□ -1.89
UBR1-205ENST00000564540 COG3Q96JB2 828 aa3.27□□□□□ -1.89
UBR1-205ENST00000564540 SLC26A1Q9H2B4 701 aa3.27□□□□□ -1.89
UBR1-205ENST00000564540 ASB8Q9H765 288 aa3.27□□□□□ -1.89
UBR1-205ENST00000564540 DNAJC11Q9NVH1 559 aa3.27□□□□□ -1.89
UBR1-205ENST00000564540 ADAM22Q9P0K1 906 aa3.27□□□□□ -1.89
UBR1-205ENST00000564540 KIF7Q2M1P5 1343 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 FRG2CA6NGY1 282 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 EPOPA6NHQ4 379 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 A8MX80 341 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 SLC33A1O00400 549 aaPredicted RBP3.26□□□□□ -1.89
UBR1-205ENST00000564540 PSMD3O43242 534 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 SNRPCP09234 159 aaKnown RBP3.26□□□□□ -1.89
UBR1-205ENST00000564540 IL2RGP31785 369 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 STX17P56962 302 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 PRKCEQ02156 737 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 EIF4EBP2Q13542 120 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms