RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 HIST2H2BCQ6DN03 193 aa17■□□□□ 0.31
PKD1-227ENST00000564313 FAM71E1Q6IPT2 247 aa17■□□□□ 0.31
PKD1-227ENST00000564313 LRRC25Q8N386 305 aaPredicted RBP17■□□□□ 0.31
PKD1-227ENST00000564313 NUBPLQ8TB37 319 aa17■□□□□ 0.31
PKD1-227ENST00000564313 PUM2Q8TB72 1066 aaKnown RBP eCLIP17■□□□□ 0.31
PKD1-227ENST00000564313 UCN3Q969E3 161 aa17■□□□□ 0.31
PKD1-227ENST00000564313 UTP23Q9BRU9 249 aaKnown RBP17■□□□□ 0.31
PKD1-227ENST00000564313 CNPPD1Q9BV87 410 aa17■□□□□ 0.31
PKD1-227ENST00000564313 CXorf21Q9HAI6 301 aa17■□□□□ 0.31
PKD1-227ENST00000564313 HEY2Q9UBP5 337 aa17■□□□□ 0.31
PKD1-227ENST00000564313 ZNF223Q9UK11 482 aaPredicted RBP17■□□□□ 0.31
PKD1-227ENST00000564313 SPENQ96T58 3664 aaKnown RBP16.99■□□□□ 0.31
PKD1-227ENST00000564313 SNNO75324 88 aaPredicted RBP16.99■□□□□ 0.31
PKD1-227ENST00000564313 ERVK-8P63133 956 aa16.99■□□□□ 0.31
PKD1-227ENST00000564313 RNF4P78317 190 aa16.99■□□□□ 0.31
PKD1-227ENST00000564313 ZNF267Q14586 743 aaPredicted RBP16.99■□□□□ 0.31
PKD1-227ENST00000564313 CEBPEQ15744 281 aa16.99■□□□□ 0.31
PKD1-227ENST00000564313 INAQ16352 499 aa16.99■□□□□ 0.31
PKD1-227ENST00000564313 RFTN2Q52LD8 501 aaPredicted RBP16.99■□□□□ 0.31
PKD1-227ENST00000564313 FCRLBQ6BAA4 426 aa16.99■□□□□ 0.31
PKD1-227ENST00000564313 RNF111Q6ZNA4 994 aa16.99■□□□□ 0.31
PKD1-227ENST00000564313 LRRC34Q8IZ02 419 aa16.99■□□□□ 0.31
PKD1-227ENST00000564313 MMP21Q8N119 569 aa16.99■□□□□ 0.31
PKD1-227ENST00000564313 OR7G1Q8NGA0 311 aa16.99■□□□□ 0.31
PKD1-227ENST00000564313 CDC26Q8NHZ8 85 aa16.99■□□□□ 0.31
PKD1-227ENST00000564313 ZNF764Q96H86 408 aaPredicted RBP16.99■□□□□ 0.31
PKD1-227ENST00000564313 NPAS2Q99743 824 aa16.99■□□□□ 0.31
PKD1-227ENST00000564313 C20orf27Q9GZN8 174 aa16.99■□□□□ 0.31
PKD1-227ENST00000564313 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.99■□□□□ 0.31
PKD1-227ENST00000564313 SLC35C2Q9NQQ7 365 aa16.99■□□□□ 0.31
PKD1-227ENST00000564313 TAS2R7Q9NYW3 318 aa16.99■□□□□ 0.31
PKD1-227ENST00000564313 ERVK-19Q9WJR5 959 aa16.99■□□□□ 0.31
PKD1-227ENST00000564313 YARS2Q9Y2Z4 477 aaKnown RBP16.99■□□□□ 0.31
PKD1-227ENST00000564313 UQCRHLA0A096LP55 91 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 TTLL8A6PVC2 850 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 SLCO1B7G3V0H7 640 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 VPS4BO75351 444 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 SASH3O75995 380 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 NT5EP21589 574 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 TRHRP34981 398 aaPredicted RBP16.98■□□□□ 0.31
PKD1-227ENST00000564313 FEN1P39748 380 aaKnown RBP16.98■□□□□ 0.31
PKD1-227ENST00000564313 CYB561P49447 251 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 FUT7Q11130 342 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 PLEKHN1Q494U1 663 aaPredicted RBP16.98■□□□□ 0.31
PKD1-227ENST00000564313 RPUSD3Q6P087 351 aaKnown RBP16.98■□□□□ 0.31
PKD1-227ENST00000564313 DGAT2L6Q6ZPD8 337 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 SLC29A4Q7RTT9 530 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 GPALPP1Q8IXQ4 340 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 FAM26EQ8N5C1 309 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 AMER2Q8N7J2 671 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 EXOSC8Q96B26 276 aaKnown RBP16.98■□□□□ 0.31
PKD1-227ENST00000564313 TUBGCP3Q96CW5 907 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 ERP27Q96DN0 273 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 CNRIP1Q96F85 164 aaPredicted RBP16.98■□□□□ 0.31
PKD1-227ENST00000564313 ZNF681Q96N22 645 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 TRIM45Q9H8W5 580 aaPredicted RBP16.98■□□□□ 0.31
PKD1-227ENST00000564313 PLA2G3Q9NZ20 509 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 MYOTQ9UBF9 498 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 CFL2Q9Y281 166 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 PCDHGB6Q9Y5F9 930 aa16.98■□□□□ 0.31
PKD1-227ENST00000564313 ENO4A6NNW6 628 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 PEX11AO75192 247 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 ITGA10O75578 1167 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 SLITRK5O94991 958 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 PRPS2P11908 318 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 SDC1P18827 310 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 NTSP30990 170 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 MPIP34949 423 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 RPL3P39023 403 aaKnown RBP16.97■□□□□ 0.31
PKD1-227ENST00000564313 SSR4P51571 173 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 PPP2R2AP63151 447 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 MAP4K2Q12851 820 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 TUBA3CQ13748 450 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 PDCD2Q16342 344 aaPredicted RBP16.97■□□□□ 0.31
PKD1-227ENST00000564313 C6orf136Q5SQH8 315 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 TUBA3EQ6PEY2 450 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 R3HCC1LQ7Z5L2 792 aaKnown RBP16.97■□□□□ 0.31
PKD1-227ENST00000564313 TICAM1Q8IUC6 712 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 VWA5B2Q8N398 1253 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 TMEM156Q8N614 296 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 Q8NA96 180 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 FNDC5Q8NAU1 212 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 ZNF675Q8TD23 568 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 MTERF3Q96E29 417 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 C3orf30Q96M34 536 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 ZNF395Q9H8N7 513 aaPredicted RBP16.97■□□□□ 0.31
PKD1-227ENST00000564313 PCDHGA10Q9Y5H3 936 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 CSAG2Q9Y5P2 127 aa16.97■□□□□ 0.31
PKD1-227ENST00000564313 ATP6AP2A0A1C7CYW4 349 aa16.96■□□□□ 0.31
PKD1-227ENST00000564313 TRPC5OSA6NMA1 111 aa16.96■□□□□ 0.31
PKD1-227ENST00000564313 MAN1A2O60476 641 aa16.96■□□□□ 0.31
PKD1-227ENST00000564313 TBX19O60806 448 aa16.96■□□□□ 0.31
PKD1-227ENST00000564313 PRAMEF2O60811 474 aa16.96■□□□□ 0.31
PKD1-227ENST00000564313 ATP6AP2O75787 350 aa16.96■□□□□ 0.31
PKD1-227ENST00000564313 BCAS2O75934 225 aaPredicted RBP16.96■□□□□ 0.31
PKD1-227ENST00000564313 PCSK2P16519 638 aa16.96■□□□□ 0.31
PKD1-227ENST00000564313 TACR1P25103 407 aa16.96■□□□□ 0.31
PKD1-227ENST00000564313 HLCSP50747 726 aa16.96■□□□□ 0.31
PKD1-227ENST00000564313 HK2P52789 917 aa16.96■□□□□ 0.31
PKD1-227ENST00000564313 SLC37A1P57057 533 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms