RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 YKT6O15498 198 aa16.74■□□□□ 0.27
GDE1-203ENST00000564172 ERN1O75460 977 aaKnown RBP16.74■□□□□ 0.27
GDE1-203ENST00000564172 CCNKO75909 580 aa16.74■□□□□ 0.27
GDE1-203ENST00000564172 S100A6P06703 90 aa16.74■□□□□ 0.27
GDE1-203ENST00000564172 IL3P08700 152 aa16.74■□□□□ 0.27
GDE1-203ENST00000564172 FURINP09958 794 aa16.74■□□□□ 0.27
GDE1-203ENST00000564172 ASPGQ86U10 573 aa16.74■□□□□ 0.27
GDE1-203ENST00000564172 AMER3Q8N944 861 aa16.74■□□□□ 0.27
GDE1-203ENST00000564172 DTX3Q8N9I9 347 aa16.74■□□□□ 0.27
GDE1-203ENST00000564172 OR2L5Q8NG80 312 aa16.74■□□□□ 0.27
GDE1-203ENST00000564172 DNAJB8Q8NHS0 232 aa16.74■□□□□ 0.27
GDE1-203ENST00000564172 TM4SF18Q96CE8 201 aa16.74■□□□□ 0.27
GDE1-203ENST00000564172 INPP5KQ9BT40 448 aa16.74■□□□□ 0.27
GDE1-203ENST00000564172 SLC6A16Q9GZN6 736 aa16.74■□□□□ 0.27
GDE1-203ENST00000564172 FAM120CQ9NX05 1096 aaKnown RBP16.74■□□□□ 0.27
GDE1-203ENST00000564172 SLC25A37Q9NYZ2 338 aa16.74■□□□□ 0.27
GDE1-203ENST00000564172 PI4KAP42356 2102 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 C4orf51C9J302 202 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 ATP6V1G2-DDX39BF2Z307 99 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 ACOT8O14734 319 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 ERI3O43414 337 aaKnown RBP16.73■□□□□ 0.27
GDE1-203ENST00000564172 BCAS2O75934 225 aaPredicted RBP16.73■□□□□ 0.27
GDE1-203ENST00000564172 PAHP00439 452 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 PROS1P07225 676 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 ICAM2P13598 275 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 PDE7AQ13946 482 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 NRF1Q16656 503 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 ESCO2Q56NI9 601 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 LRIF1Q5T3J3 769 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 ABHD17CQ6PCB6 329 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 ZNF793Q6ZN11 406 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 IKBIPQ70UQ0 350 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 R3HCC1LQ7Z5L2 792 aaKnown RBP16.73■□□□□ 0.27
GDE1-203ENST00000564172 MSRB3Q8IXL7 192 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 ZNF786Q8N393 782 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 PACRGLQ8N7B6 248 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 OR5H6Q8NGV6 325 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 ASB9Q96DX5 294 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 TM4SF19Q96DZ7 209 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 ZFYVE21Q9BQ24 234 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 PCDHAC1Q9H158 963 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 SLC6A13Q9NSD5 602 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.73■□□□□ 0.27
GDE1-203ENST00000564172 PCDHB14Q9Y5E9 798 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 TTC28Q96AY4 2481 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 A0A096LPI6 279 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 TRBV5-3A0A0A0MS03 114 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 A0A1W2PQ72 361 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 TMPRSS11DO60235 418 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 HSD17B1P14061 328 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 PTPN6P29350 595 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 CNR2P34972 360 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 RPL3P39023 403 aaKnown RBP16.73■□□□□ 0.27
GDE1-203ENST00000564172 SSR2P43308 183 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 HAAOP46952 286 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 CAPZBP47756 277 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 ARFIP1P53367 373 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 RAD23AP54725 363 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 STXBP1P61764 594 aaKnown RBP16.73■□□□□ 0.27
GDE1-203ENST00000564172 MRPS15P82914 257 aaKnown RBP16.73■□□□□ 0.27
GDE1-203ENST00000564172 ZNF385BQ569K4 471 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 TOR1AIP1Q5JTV8 583 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 PEAR1Q5VY43 1037 aaPredicted RBP16.73■□□□□ 0.27
GDE1-203ENST00000564172 ADGRG5Q8IZF4 528 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 ZCCHC7Q8N3Z6 543 aaKnown RBP16.73■□□□□ 0.27
GDE1-203ENST00000564172 KCT2Q8NC54 265 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 SRFBP1Q8NEF9 429 aaKnown RBP16.73■□□□□ 0.27
GDE1-203ENST00000564172 NRBF2Q96F24 287 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 KCNC2Q96PR1 638 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 CHID1Q9BWS9 393 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 SEMA6CQ9H3T2 930 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 PRDM7Q9NQW5 492 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 CROCCQ5TZA2 2017 aa16.73■□□□□ 0.27
GDE1-203ENST00000564172 A0A0A6YYD5 115 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 CENPXA8MT69 81 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 RFXANKO14593 260 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 BTF3P20290 206 aaKnown RBP16.72■□□□□ 0.27
GDE1-203ENST00000564172 EVI2BP34910 448 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 CDKN2CP42773 168 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 MTPNP58546 118 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 OLR1P78380 273 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 POU6F2P78424 691 aaPredicted RBP16.72■□□□□ 0.27
GDE1-203ENST00000564172 S100A12P80511 92 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 RGS1Q08116 209 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 SPATS1Q496A3 300 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 GTDC1Q4AE62 458 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 IRAK1BP1Q5VVH5 260 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 FRMPD2BQ6IN97 320 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 TRIM40Q6P9F5 258 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 KCTD8Q6ZWB6 473 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 MFSD4AQ8N468 514 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 OR8J3Q8NGG0 315 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 NT5CQ8TCD5 201 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 MTERF3Q96E29 417 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 SECISBP2Q96T21 854 aaKnown RBP16.72■□□□□ 0.27
GDE1-203ENST00000564172 BHLHE41Q9C0J9 482 aaPredicted RBP16.72■□□□□ 0.27
GDE1-203ENST00000564172 FSCN3Q9NQT6 498 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 LRIT1Q9P2V4 623 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 RNF215Q9Y6U7 377 aa16.72■□□□□ 0.27
GDE1-203ENST00000564172 TP53BP1Q12888 1972 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms