RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 KHKP50053 298 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 EEFSECP57772 596 aaKnown RBP12.01□□□□□ -0.49
CLK3-214ENST00000564096 MTPNP58546 118 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 RHAGQ02094 409 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 TP53BP2Q13625 1128 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 ERV3-1Q14264 604 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 ELAVL1Q15717 326 aaKnown RBP12.01□□□□□ -0.49
CLK3-214ENST00000564096 NSDHLQ15738 373 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 NKG7Q16617 165 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 ZNF750Q32MQ0 723 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 RUNDC3AQ59EK9 446 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 ZNF628Q5EBL2 1059 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 NANOGP8Q6NSW7 305 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 MRPL14Q6P1L8 145 aaKnown RBP12.01□□□□□ -0.49
CLK3-214ENST00000564096 IGF2-ASQ6U949 168 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 ZNF517Q6ZMY9 492 aaPredicted RBP12.01□□□□□ -0.49
CLK3-214ENST00000564096 ULK2Q8IYT8 1036 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 NLGN4XQ8N0W4 816 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 NLGN4YQ8NFZ3 816 aaPredicted RBP12.01□□□□□ -0.49
CLK3-214ENST00000564096 OR5AK3PQ8NH89 298 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 OR14A16Q8NHC5 309 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 ZFP90Q8TF47 636 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 RIT1Q92963 219 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 NXPE2Q96DL1 559 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 NEURL3Q96EH8 262 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 RNF31Q96EP0 1072 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 SLC35G5Q96KT7 338 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 CDRT15Q96T59 188 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 ECSITQ9BQ95 431 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 SPATA9Q9BWV2 254 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 CADM1Q9BY67 442 aaKnown RBP12.01□□□□□ -0.49
CLK3-214ENST00000564096 ALG2Q9H553 416 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 SOX17Q9H6I2 414 aaPredicted RBP12.01□□□□□ -0.49
CLK3-214ENST00000564096 NANOGQ9H9S0 305 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 THSD1Q9NS62 852 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 THUMPD1Q9NXG2 353 aaKnown RBP12.01□□□□□ -0.49
CLK3-214ENST00000564096 SLC25A37Q9NYZ2 338 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 FOXJ2Q9P0K8 574 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 SLAMF8Q9P0V8 285 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 C3orf18Q9UK00 162 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 ACSL6Q9UKU0 697 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 GMEB1Q9Y692 573 aa12.01□□□□□ -0.49
CLK3-214ENST00000564096 A0A1W2PNU3 283 aaPredicted RBP12□□□□□ -0.49
CLK3-214ENST00000564096 TCRBV16S1A1N1A0A5B0 115 aa12□□□□□ -0.49
CLK3-214ENST00000564096 WASHC1A8K0Z3 465 aa12□□□□□ -0.49
CLK3-214ENST00000564096 IDSB3KWA1 339 aa12□□□□□ -0.49
CLK3-214ENST00000564096 C21orf140B9A014 251 aa12□□□□□ -0.49
CLK3-214ENST00000564096 PLOD2O00469 737 aa12□□□□□ -0.49
CLK3-214ENST00000564096 GSC2O15499 205 aa12□□□□□ -0.49
CLK3-214ENST00000564096 BRINP1O60477 761 aa12□□□□□ -0.49
CLK3-214ENST00000564096 RAD1O60671 282 aa12□□□□□ -0.49
CLK3-214ENST00000564096 ALOX12BO75342 701 aa12□□□□□ -0.49
CLK3-214ENST00000564096 BCAS2O75934 225 aaPredicted RBP12□□□□□ -0.49
CLK3-214ENST00000564096 IGHEP01854 428 aa12□□□□□ -0.49
CLK3-214ENST00000564096 RAB40ALP0C0E4 278 aa12□□□□□ -0.49
CLK3-214ENST00000564096 TNNI3P19429 210 aa12□□□□□ -0.49
CLK3-214ENST00000564096 CCT3P49368 545 aaKnown RBP12□□□□□ -0.49
CLK3-214ENST00000564096 EMP2P54851 167 aa12□□□□□ -0.49
CLK3-214ENST00000564096 BTG2P78543 158 aa12□□□□□ -0.49
CLK3-214ENST00000564096 BNIP2Q12982 314 aa12□□□□□ -0.49
CLK3-214ENST00000564096 LTB4RQ15722 352 aa12□□□□□ -0.49
CLK3-214ENST00000564096 CYP51A1Q16850 503 aa12□□□□□ -0.49
CLK3-214ENST00000564096 RABL3Q5HYI8 236 aa12□□□□□ -0.49
CLK3-214ENST00000564096 SAXO2Q658L1 398 aa12□□□□□ -0.49
CLK3-214ENST00000564096 MSRB3Q8IXL7 192 aa12□□□□□ -0.49
CLK3-214ENST00000564096 OR2L13Q8N349 312 aa12□□□□□ -0.49
CLK3-214ENST00000564096 FBXW8Q8N3Y1 598 aa12□□□□□ -0.49
CLK3-214ENST00000564096 PLPP5Q8NEB5 264 aa12□□□□□ -0.49
CLK3-214ENST00000564096 OR52N2Q8NGI0 321 aa12□□□□□ -0.49
CLK3-214ENST00000564096 DAZLQ92904 295 aaKnown RBP12□□□□□ -0.49
CLK3-214ENST00000564096 TSLPQ969D9 159 aa12□□□□□ -0.49
CLK3-214ENST00000564096 TMEM125Q96AQ2 219 aa12□□□□□ -0.49
CLK3-214ENST00000564096 FAM120BQ96EK7 910 aaKnown RBP12□□□□□ -0.49
CLK3-214ENST00000564096 AURKBQ96GD4 344 aaPredicted RBP12□□□□□ -0.49
CLK3-214ENST00000564096 VPS50Q96JG6 964 aa12□□□□□ -0.49
CLK3-214ENST00000564096 SPSB2Q99619 263 aa12□□□□□ -0.49
CLK3-214ENST00000564096 KCTD14Q9BQ13 255 aaPredicted RBP12□□□□□ -0.49
CLK3-214ENST00000564096 NRSN2Q9GZP1 204 aa12□□□□□ -0.49
CLK3-214ENST00000564096 MUC13Q9H3R2 512 aa12□□□□□ -0.49
CLK3-214ENST00000564096 NECTIN3Q9NQS3 549 aa12□□□□□ -0.49
CLK3-214ENST00000564096 SIRT3Q9NTG7 399 aaPredicted RBP12□□□□□ -0.49
CLK3-214ENST00000564096 DLL3Q9NYJ7 618 aa12□□□□□ -0.49
CLK3-214ENST00000564096 TMEM181Q9P2C4 612 aa12□□□□□ -0.49
CLK3-214ENST00000564096 FAF1Q9UNN5 650 aaPredicted RBP12□□□□□ -0.49
CLK3-214ENST00000564096 NEUROG3Q9Y4Z2 214 aa12□□□□□ -0.49
CLK3-214ENST00000564096 FAM186AA6NE01 2351 aa12□□□□□ -0.49
CLK3-214ENST00000564096 A0A1W2PS29 197 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 TMEM247A6NEH6 219 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 FAM220BPB1ANY3 271 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 C17orf105B2RV13 164 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 NME4O00746 187 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 PLOD3O60568 738 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 PRAMEF2O60811 474 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 GMNNO75496 209 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 PDE5AO76074 875 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 HSD17B1P14061 328 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 NQO1P15559 274 aaKnown RBP11.99□□□□□ -0.49
CLK3-214ENST00000564096 ME2P23368 584 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 CRATP43155 626 aa11.99□□□□□ -0.49
CLK3-214ENST00000564096 PRIM2P49643 509 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms