RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.1□□□□□ -0.47
SPG7-209ENST00000564047 RFXANKO14593 260 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 DXOO77932 396 aaKnown RBP12.1□□□□□ -0.47
SPG7-209ENST00000564047 KCNH1O95259 989 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 ANP32DO95626 131 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 CPSF4O95639 269 aaKnown RBP12.1□□□□□ -0.47
SPG7-209ENST00000564047 C6orf47O95873 294 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 RECKO95980 971 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 ZCCHC18P0CG32 403 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 SLC35E2P0CK97 266 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 C8orf89P0DMQ9 161 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 ATXN8OSP0DMR3 200 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 PLA2G2AP14555 144 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 SLC5A2P31639 672 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 NUDT2P50583 147 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 NCBP2P52298 156 aaKnown RBP eCLIP12.1□□□□□ -0.47
SPG7-209ENST00000564047 BTG2P78543 158 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 RHAGQ02094 409 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 STX4Q12846 297 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 CAMK2BQ13554 666 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 NFYCQ13952 458 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 RTP5Q14D33 572 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 ZNF750Q32MQ0 723 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 MINDY4Q4G0A6 757 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 C6orf10Q5SRN2 563 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 CPZQ66K79 652 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 FAM180BQ6P0A1 224 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 FAM199XQ6PEV8 388 aaPredicted RBP12.1□□□□□ -0.47
SPG7-209ENST00000564047 FAM198BQ6UWH4 519 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 CCDC116Q8IYX3 515 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 OR4A15Q8NGL6 344 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 PSMA8Q8TAA3 256 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 SUN3Q8TAQ9 357 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 PTCHD1Q96NR3 888 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 PHF12Q96QT6 1004 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 SPSB2Q99619 263 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 PELOQ9BRX2 385 aaKnown RBP12.1□□□□□ -0.47
SPG7-209ENST00000564047 INPP5KQ9BT40 448 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 FAM117AQ9C073 453 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 PAIP1Q9H074 479 aaKnown RBP12.1□□□□□ -0.47
SPG7-209ENST00000564047 NEUROD4Q9HD90 331 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 NDE1Q9NXR1 346 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 TAS2R9Q9NYW1 312 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 L3MBTL1Q9Y468 752 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 CLDN16Q9Y5I7 305 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 HECTD1Q9ULT8 2610 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 MGAQ8IWI9 3026 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 IGKV3D-11A0A0A0MRZ8 115 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 A0A1W2PS29 197 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 STMND1H3BQB6 276 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 TGFBR3LH3BV60 316 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 RAD1O60671 282 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 CNOT3O75175 753 aaKnown RBP12.09□□□□□ -0.47
SPG7-209ENST00000564047 C1QL1O75973 258 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 SLITRK5O94991 958 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 ATP1B1P05026 303 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 RAB40ALP0C0E4 278 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 HOXB9P17482 250 aaPredicted RBP12.09□□□□□ -0.47
SPG7-209ENST00000564047 EFNA1P20827 205 aaPredicted RBP12.09□□□□□ -0.47
SPG7-209ENST00000564047 MAOAP21397 527 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 PTPN6P29350 595 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 GALNSP34059 522 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 CPOXP36551 454 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 CDKN2CP42773 168 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 GTF2A1P52655 376 aaPredicted RBP12.09□□□□□ -0.47
SPG7-209ENST00000564047 HBA1P69905 142 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 MXRA7P84157 204 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 PLIN5Q00G26 463 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 ID2Q02363 134 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 DUSP2Q05923 314 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 NCF4Q15080 339 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 MFSD4BQ5TF39 518 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 C8orf82Q6P1X6 216 aaPredicted RBP12.09□□□□□ -0.47
SPG7-209ENST00000564047 DLEU7Q6UYE1 221 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 ZNF551Q7Z340 670 aaPredicted RBP12.09□□□□□ -0.47
SPG7-209ENST00000564047 DHDDSQ86SQ9 333 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 LAPTM4BQ86VI4 370 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 ST13P4Q8IZP2 240 aaPredicted RBP12.09□□□□□ -0.47
SPG7-209ENST00000564047 NLGN4XQ8N0W4 816 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 NLGN4YQ8NFZ3 816 aaPredicted RBP12.09□□□□□ -0.47
SPG7-209ENST00000564047 LRRC58Q96CX6 371 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 HOPXQ9BPY8 73 aaPredicted RBP12.09□□□□□ -0.47
SPG7-209ENST00000564047 ALOXE3Q9BYJ1 711 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 VN1R1Q9GZP7 353 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 ASCL3Q9NQ33 180 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 NECTIN3Q9NQS3 549 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 SEMA3GQ9NS98 782 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 SLAMF8Q9P0V8 285 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 STOML1Q9UBI4 398 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 CROTQ9UKG9 612 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 ACSL6Q9UKU0 697 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 MKL2Q9ULH7 1088 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 VPS4AQ9UN37 437 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 ERVK-11Q9UQG0 969 aa12.09□□□□□ -0.47
SPG7-209ENST00000564047 SCN3AQ9NY46 2000 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 PTPRQQ9UMZ3 2332 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 TRBV5-3A0A0A0MS03 114 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 TCRBV16S1A1N1A0A5B0 115 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 OR2W5A6NFC9 320 aa12.08□□□□□ -0.48
SPG7-209ENST00000564047 IDSB3KWA1 339 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms