RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 TRGV5A0A0B4J1U4 118 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 ATP6AP2A0A1C7CYW4 349 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 LRRC3CA6NJW4 275 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 FOXO6A8MYZ6 492 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 PGRMC2O15173 223 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 ATP6AP2O75787 350 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 KRT38O76015 456 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 RPS17P08708 135 aaKnown RBP15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 GLI4P10075 376 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 ECHS1P30084 290 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 CCNG1P51959 295 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 KRTAP10-9P60411 292 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 TBCELQ5QJ74 424 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 B3GNT6Q6ZMB0 384 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 TAOK1Q7L7X3 1001 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 CCDC71Q8IV32 467 aaPredicted RBP15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 DMRTC2Q8IXT2 367 aaPredicted RBP15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 TAGAPQ8N103 731 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 TMEM151AQ8N4L1 468 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 ZNF615Q8N8J6 731 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 C17orf47Q8NEP4 570 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 OR10G3Q8NGC4 313 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 OR5M9Q8NGP3 310 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 ATP6V1E2Q96A05 226 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 NTNG2Q96CW9 530 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 PHF21BQ96EK2 531 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 SECISBP2Q96T21 854 aaKnown RBP15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 PAFAH2Q99487 392 aa15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 MRPL57Q9BQC6 102 aaKnown RBP15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 TEX10Q9NXF1 929 aaPredicted RBP15.84■□□□□ 0.13
VPS9D1-203ENST00000563798 C2orf92A0A1B0GVN3 265 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 SMIM24O75264 130 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 TRIM3O75382 744 aaPredicted RBP15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 URI1O94763 535 aaPredicted RBP15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 ACSL3O95573 720 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 RFPL3SP0C7P2 107 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 ENDOUP21128 410 aaKnown RBP15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 PIK3R1P27986 724 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 KCNJ2P63252 427 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 TLE4Q04727 773 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 GLE1Q53GS7 698 aaKnown RBP15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 WLSQ5T9L3 541 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 PAGE2Q7Z2X7 111 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 GALNT12Q8IXK2 581 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 METTL4Q8N3J2 472 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 DCAKDQ8WVC6 231 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 NSUN5Q96P11 429 aaKnown RBP15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 GAL3ST4Q96RP7 486 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 FMO2Q99518 471 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 UCK2Q9BZX2 261 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 MRPL46Q9H2W6 279 aaKnown RBP15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 ACAD8Q9UKU7 415 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 HCFC1P51610 2035 aa15.83■□□□□ 0.12
VPS9D1-203ENST00000563798 POLQO75417 2590 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 NKX2-6A6NCS4 301 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 CAPN14A8MX76 684 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 FAM47E-STBD1D6RA91 191 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 GBAP04062 536 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 KLK1P06870 262 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 SBK3P0C264 359 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 GABRA1P14867 456 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 IFT88Q13099 833 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 PRAMEF20Q5VT98 475 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 ZNF585AQ6P3V2 769 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 MILR1Q7Z6M3 343 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 FAM13CQ8NE31 585 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 OR7G1Q8NGA0 311 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 OR4F6Q8NGB9 312 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 OR4K14Q8NGD5 310 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 DOK4Q8TEW6 326 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 ZNF483Q8TF39 744 aaPredicted RBP15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 ADIPOR1Q96A54 375 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 LDAHQ9H6V9 325 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 BRF2Q9HAW0 419 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 SLC24A3Q9HC58 644 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 SPRR3Q9UBC9 169 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 CES1P1Q9UKY3 287 aa15.82■□□□□ 0.12
VPS9D1-203ENST00000563798 A0A1W2PS29 197 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 FAM90A27PA6NNH2 459 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 TP53I11O14683 189 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 GUCY1B2O75343 617 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 OTCP00480 354 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 CT62P0C5K7 136 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 CPMP14384 443 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 S1PR1P21453 382 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 SSTR4P31391 388 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 ZFP36L2P47974 494 aaKnown RBP15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 XKP51811 444 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 RPS6KA2Q15349 733 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 TESK1Q15569 626 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 CCNYL2Q5T2Q4 361 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 C1orf185Q5T7R7 199 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 RIPPLY2Q5TAB7 128 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 TTC19Q6DKK2 380 aaPredicted RBP15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 NOA1Q8NC60 698 aaKnown RBP15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 NEIL3Q8TAT5 605 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 SPPL2AQ8TCT8 520 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 C16orf45Q96MC5 204 aaPredicted RBP15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 DOHHQ9BU89 302 aa15.81■□□□□ 0.12
VPS9D1-203ENST00000563798 ANGPTL4Q9BY76 406 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms