RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 APLFQ8IW19 511 aaPredicted RBP17.55■□□□□ 0.4
RAB40C-207ENST00000563109 NFAM1Q8NET5 270 aaPredicted RBP17.55■□□□□ 0.4
RAB40C-207ENST00000563109 ADCY4Q8NFM4 1077 aa17.55■□□□□ 0.4
RAB40C-207ENST00000563109 OR8J2Q8NGG1 315 aa17.55■□□□□ 0.4
RAB40C-207ENST00000563109 SUN3Q8TAQ9 357 aa17.55■□□□□ 0.4
RAB40C-207ENST00000563109 ZNF675Q8TD23 568 aa17.55■□□□□ 0.4
RAB40C-207ENST00000563109 NCLNQ969V3 563 aa17.55■□□□□ 0.4
RAB40C-207ENST00000563109 TEX37Q96LM6 180 aa17.55■□□□□ 0.4
RAB40C-207ENST00000563109 GLIPR2Q9H4G4 154 aa17.55■□□□□ 0.4
RAB40C-207ENST00000563109 MMP25Q9NPA2 562 aa17.55■□□□□ 0.4
RAB40C-207ENST00000563109 TMEM45AQ9NWC5 275 aa17.55■□□□□ 0.4
RAB40C-207ENST00000563109 FAM120CQ9NX05 1096 aaKnown RBP17.55■□□□□ 0.4
RAB40C-207ENST00000563109 ERVK-19Q9WJR5 959 aa17.55■□□□□ 0.4
RAB40C-207ENST00000563109 KCNMB2Q9Y691 235 aa17.55■□□□□ 0.4
RAB40C-207ENST00000563109 FAM234BA2RU67 622 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 C9JVG2 144 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 DDAH2O95865 285 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 FAM107AO95990 144 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 ITGB2P05107 769 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 IL6P05231 212 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 FRKP42685 505 aaPredicted RBP17.54■□□□□ 0.4
RAB40C-207ENST00000563109 CLCN2P51788 898 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 POLR2JP52435 117 aaKnown RBP17.54■□□□□ 0.4
RAB40C-207ENST00000563109 KCNK10P57789 538 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 MAP4K2Q12851 820 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 MPEG1Q2M385 716 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 PRICKLE4Q2TBC4 344 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 ZNF628Q5EBL2 1059 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 OR4F3Q6IEY1 312 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 JMJD6Q6NYC1 403 aaPredicted RBP17.54■□□□□ 0.4
RAB40C-207ENST00000563109 RNF111Q6ZNA4 994 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 GPR155Q7Z3F1 870 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 OR9I1Q8NGQ6 314 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 OR1N1Q8NGS0 311 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 NUDT8Q8WV74 236 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 ERP27Q96DN0 273 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 SENP5Q96HI0 755 aaPredicted RBP17.54■□□□□ 0.4
RAB40C-207ENST00000563109 THOC3Q96J01 351 aaKnown RBP17.54■□□□□ 0.4
RAB40C-207ENST00000563109 SLAMF7Q9NQ25 335 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 MAT2BQ9NZL9 334 aa17.54■□□□□ 0.4
RAB40C-207ENST00000563109 PPIEQ9UNP9 301 aaKnown RBP17.54■□□□□ 0.4
RAB40C-207ENST00000563109 TRBV11-1A0A0K0K1C0 115 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 MASP2O00187 686 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 RNASET2O00584 256 aaKnown RBP17.53■□□□□ 0.4
RAB40C-207ENST00000563109 CFLARO15519 480 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 PGRP06401 933 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 IL12AP29459 219 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 PTGER1P34995 402 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 MLC1Q15049 377 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 AGKQ53H12 422 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 C19orf48Q6RUI8 117 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 TMEM107Q6UX40 140 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 ZNF551Q7Z340 670 aaPredicted RBP17.53■□□□□ 0.4
RAB40C-207ENST00000563109 GALNT16Q8N428 558 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 OR7G1Q8NGA0 311 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 DOK4Q8TEW6 326 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 ZNF721Q8TF20 911 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 OR5P2Q8WZ92 322 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 KAT2AQ92830 837 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 CCT8L2Q96SF2 557 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 LHPPQ9H008 270 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 PRORYQ9H606 182 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 ZNF385DQ9H6B1 395 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 NEUROD4Q9HD90 331 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 CCDC167Q9P0B6 97 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 PCDHGB4Q9UN71 923 aa17.53■□□□□ 0.4
RAB40C-207ENST00000563109 NR5A2O00482 541 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 CCDC22O60826 627 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 BCAS2O75934 225 aaPredicted RBP17.52■□□□□ 0.4
RAB40C-207ENST00000563109 CELA2AP08217 269 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 CT62P0C5K7 136 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 EFNA1P20827 205 aaPredicted RBP17.52■□□□□ 0.4
RAB40C-207ENST00000563109 CCL11P51671 97 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 DGKQP52824 942 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 LRRC74AQ0VAA2 488 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 Q0VFX4 171 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 TBR1Q16650 682 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 TIGD2Q4W5G0 525 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 GKAP1Q5VSY0 366 aaPredicted RBP17.52■□□□□ 0.4
RAB40C-207ENST00000563109 FAM111BQ6SJ93 734 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 HSDL2Q6YN16 418 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 MSANTD1Q6ZTZ1 278 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 CPSF7Q8N684 471 aaKnown RBP17.52■□□□□ 0.4
RAB40C-207ENST00000563109 APCDD1LQ8NCL9 501 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 ELP5Q8TE02 316 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 OR52E6Q96RD3 313 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 NUDT9Q9BW91 350 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 DEFB126Q9BYW3 111 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 SEMA4CQ9C0C4 833 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 RMND5AQ9H871 391 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 DDX18Q9NVP1 670 aaKnown RBP17.52■□□□□ 0.4
RAB40C-207ENST00000563109 BCAP29Q9UHQ4 241 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 CFL2Q9Y281 166 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 ARL2BPQ9Y2Y0 163 aa17.52■□□□□ 0.4
RAB40C-207ENST00000563109 ANKRD11Q6UB99 2663 aaPredicted RBP17.51■□□□□ 0.39
RAB40C-207ENST00000563109 PRSS51A0A1B0GVH4 220 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 CCDC154A6NI56 674 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 A6NL46 340 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 OR6C76A6NM76 312 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 HRKO00198 91 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms