RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.18□□□□□ -1.26
TCF4-216ENST00000562680 PYCR3Q53H96 274 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 BEND4Q6ZU67 534 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 KRTCAP2Q8N6L1 136 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 SERINC1Q9NRX5 453 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 PCDHGA10Q9Y5H3 936 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 U3KQV3 271 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 hCG_2039718K7EN88 272 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 WRBO00258 174 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 NR2C1P13056 603 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 MAGP20916 626 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 AK4P27144 223 aaPredicted RBP7.18□□□□□ -1.26
TCF4-216ENST00000562680 ENPP2Q13822 863 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 AGBL4Q5VU57 503 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 C6orf120Q7Z4R8 191 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 SLC51BQ86UW2 128 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 EPHX4Q8IUS5 362 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 CADM2Q8N3J6 435 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 POMGNT2Q8NAT1 580 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 NUP43Q8NFH3 380 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 KBTBD8Q8NFY9 601 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 OR7A2PQ8NGA2 310 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 OR5L2Q8NGL0 311 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 OR5AK3PQ8NH89 298 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 TCTN2Q96GX1 697 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 HSH2DQ96JZ2 352 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 TMEM74Q96NL1 305 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 PTCHD1Q96NR3 888 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 SSX3Q99909 188 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 GABRG3Q99928 467 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 GDF15Q99988 308 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 TEX101Q9BY14 249 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 PFDN2Q9UHV9 154 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 SH3BGRL2Q9UJC5 107 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 NUP50Q9UKX7 468 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 SARDHQ9UL12 918 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 NEU3Q9UQ49 428 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 TRIP11Q15643 1979 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 HPRP00739 348 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 CSTF1Q05048 431 aaKnown RBP7.18□□□□□ -1.26
TCF4-216ENST00000562680 USF2Q15853 346 aaPredicted RBP7.18□□□□□ -1.26
TCF4-216ENST00000562680 ZNF829Q3KNS6 432 aaPredicted RBP7.18□□□□□ -1.26
TCF4-216ENST00000562680 NDUFAF5Q5TEU4 345 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 LCN1P1Q5VSP4 162 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 LSMEM1Q8N8F7 131 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 PNPLA1Q8N8W4 532 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 OR8K5Q8NH50 307 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 IPCEF1Q8WWN9 437 aaPredicted RBP7.18□□□□□ -1.26
TCF4-216ENST00000562680 GFM1Q96RP9 751 aaKnown RBP7.18□□□□□ -1.26
TCF4-216ENST00000562680 SLC30A3Q99726 388 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 DHRS9Q9BPW9 319 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 HOXD1Q9GZZ0 328 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 POLR2J3Q9H1A7 115 aaKnown RBP7.18□□□□□ -1.26
TCF4-216ENST00000562680 ST14Q9Y5Y6 855 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 LYVE1Q9Y5Y7 322 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 MCIDASD6RGH6 385 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 MOSPD3O75425 235 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 GBAP04062 536 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 HEXBP07686 556 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 MTHFD2P13995 350 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 CAPN3P20807 821 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 CFL1P23528 166 aaKnown RBP7.18□□□□□ -1.26
TCF4-216ENST00000562680 FOXA1P55317 472 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 ATP6AP1Q15904 470 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 PIGGQ5H8A4 983 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 CGB2Q6NT52 195 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 IQCHQ86VS3 1027 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.18□□□□□ -1.26
TCF4-216ENST00000562680 PRSS58Q8IYP2 241 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 LGI4Q8N135 537 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 RLN3Q8WXF3 142 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 SGCDQ92629 289 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 FCGR1BQ92637 280 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 DOHHQ9BU89 302 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 MGAT4BQ9UQ53 548 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 PNMA8CA0A1B0GUJ8 204 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 A8MU76 341 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 KHNYNO15037 678 aaKnown RBP7.18□□□□□ -1.26
TCF4-216ENST00000562680 RCBTB2O95199 551 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 HIST1H1TP22492 207 aaPredicted RBP7.18□□□□□ -1.26
TCF4-216ENST00000562680 CEACAM7Q14002 265 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 SIM2Q14190 667 aaPredicted RBP7.18□□□□□ -1.26
TCF4-216ENST00000562680 ZNF267Q14586 743 aaPredicted RBP7.18□□□□□ -1.26
TCF4-216ENST00000562680 TRAM2Q15035 370 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 NEDD8Q15843 81 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 MOGQ16653 247 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 DGUOKQ16854 277 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 PRPF38BQ5VTL8 546 aaKnown RBP7.18□□□□□ -1.26
TCF4-216ENST00000562680 MLIPQ5VWP3 458 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 WASH2PQ6VEQ5 465 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 SH2D5Q6ZV89 423 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 RFPL4BQ6ZWI9 263 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 C5orf34Q96MH7 638 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 CLMPQ9H6B4 373 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 COQ10BQ9H8M1 238 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 WASH6PQ9NQA3 447 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 C1GALT1Q9NS00 363 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 PTGDR2Q9Y5Y4 395 aa7.18□□□□□ -1.26
TCF4-216ENST00000562680 OR6C65A6NJZ3 312 aa7.17□□□□□ -1.26
TCF4-216ENST00000562680 CHST10O43529 356 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms