RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 PODNL1Q6PEZ8 512 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 BRAT1Q6PJG6 821 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 NXPE4Q6UWF7 544 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 LYPD8Q6UX82 237 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 C2orf73Q8N5S3 287 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 ZFP41Q8N8Y5 198 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 NLGN4YQ8NFZ3 816 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 ZFAND1Q8TCF1 268 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 KIAA1143Q96AT1 154 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 NEURL3Q96EH8 262 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 ZNF607Q96SK3 696 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 RSPO3Q9BXY4 272 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 DNMT3AQ9Y6K1 912 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 CASP8AP2Q9UKL3 1982 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 TET1Q8NFU7 2136 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 SEC14L5O43304 696 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 PRKAR1AP10644 381 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 MAPK9P45984 424 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 PPP3R1P63098 170 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 NFE2L1Q14494 772 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 ZNF628Q5EBL2 1059 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 CNIH2Q6PI25 160 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 ZNF730Q6ZMV8 503 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 C6orf120Q7Z4R8 191 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 TCTE3Q8IZS6 198 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 IL17RCQ8NAC3 791 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 OR2A12Q8NGT7 310 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 UFD1Q92890 307 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 SNAPC3Q92966 411 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 FNDC11Q9BVV2 318 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 TRIM45Q9H8W5 580 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 SPG21Q9NZD8 308 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 C5AR2Q9P296 337 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 NLKQ9UBE8 527 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 DOCK6Q96HP0 2047 aa13.24□□□□□ -0.29
VPS9D1-202ENST00000561976 M0R3H8 397 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 RTCAO00442 366 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 HPGDSO60760 199 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 ZNF780AO75290 641 aaPredicted RBP13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 LEFTY1O75610 366 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 KCNJ5P48544 419 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 GIPRP48546 466 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 SNRPD2P62316 118 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 ARSIQ5FYB1 569 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 ASTLQ6HA08 431 aaPredicted RBP13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 IKBIPQ70UQ0 350 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 SHFQ7M4L6 423 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 ABI3BPQ7Z7G0 1075 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 DEDD2Q8WXF8 326 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 TM9SF4Q92544 642 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 AP2M1Q96CW1 435 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 RNFT2Q96EX2 444 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 GFM1Q96RP9 751 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 ACAT2Q9BWD1 397 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 ABCG4Q9H172 646 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 SLAMF7Q9NQ25 335 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 CTPS2Q9NRF8 586 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 ING3Q9NXR8 418 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 KLHL21Q9UJP4 597 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 GPSM3Q9Y4H4 160 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 PDPK1O15530 556 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 HCN1O60741 890 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 SOD2P04179 222 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 TP53P04637 393 aaPredicted RBP13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 EPHX1P07099 455 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 ALAS2P22557 587 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 MMP11P24347 488 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 MAPK12P53778 367 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 WSCD2Q2TBF2 565 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 BTBD16Q32M84 506 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 GAREM2Q75VX8 874 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 TRMT11Q7Z4G4 463 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 IQCHQ86VS3 1027 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 OR9A1PQ8NGU1 263 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 OR5P2Q8WZ92 322 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 SLC9A6Q92581 669 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 WDR34Q96EX3 536 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 MED18Q9BUE0 208 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 RBFOX1Q9NWB1 397 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 TESQ9UGI8 421 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 ICKQ9UPZ9 632 aa13.23□□□□□ -0.29
VPS9D1-202ENST00000561976 NEDD8-MDP1E9PL57 170 aa13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 STK25O00506 426 aa13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 MMP20O60882 483 aa13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 CTSAP10619 480 aa13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 GZMKP49863 264 aa13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 FABP5Q01469 135 aa13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 TAP2Q03519 686 aa13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 P2RY14Q15391 338 aa13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 CCDC85BQ15834 202 aaPredicted RBP13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 C3orf38Q5JPI3 329 aa13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 HMGN2P46Q86SG4 172 aa13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 DDX53Q86TM3 631 aaKnown RBP13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 MEX3DQ86XN8 651 aaKnown RBP13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 OR4K5Q8NGD3 323 aa13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 GPR52Q9Y2T5 361 aa13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 A0A0G2JMP0 313 aa13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 LEFTY2O00292 366 aa13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 HMGN4O00479 90 aa13.22□□□□□ -0.29
VPS9D1-202ENST00000561976 EFEMP2O95967 443 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms