RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 PAMR1Q6UXH9 720 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ZNF782Q6ZMW2 699 aaPredicted RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 TIFABQ6ZNK6 161 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 CLEC20AQ6ZU45 233 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 BNIPLQ7Z465 357 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 C17orf82Q86X59 251 aaPredicted RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 UNC45BQ8IWX7 931 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 DEFB106AQ8N104 65 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 PQLC3Q8N755 202 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ENDOVQ8N8Q3 282 aaKnown RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 CLEC1AQ8NC01 280 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 FAM98AQ8NCA5 519 aaKnown RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 HJURPQ8NCD3 748 aaPredicted RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 CCNYQ8ND76 341 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 SRFBP1Q8NEF9 429 aaKnown RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 DENND6BQ8NEG7 585 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 OR2A12Q8NGT7 310 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 GSDMBQ8TAX9 411 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 RAB3IL1Q8TBN0 382 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 LRRC8CQ8TDW0 803 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 SLC44A1Q8WWI5 657 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ASB12Q8WXK4 309 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ROBO4Q8WZ75 1007 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 DDB2Q92466 427 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 TRMT61AQ96FX7 289 aaKnown RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 PPP1R16AQ96I34 528 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 C1orf74Q96LT6 269 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 C9orf72Q96LT7 481 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 PRICKLE1Q96MT3 831 aaPredicted RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 SPATA13Q96N96 652 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 GPR78Q96P69 363 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 OLFM3Q96PB7 478 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 TSGA13Q96PP4 275 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ZNF317Q96PQ6 595 aaPredicted RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 QKIQ96PU8 341 aaKnown RBP eCLIP3.03□□□□□ -1.92
SPG11-225ENST00000561391 EBNA1BP2Q99848 306 aaKnown RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 PRMT1Q99873 361 aaKnown RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 SNRNP25Q9BV90 132 aaKnown RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 PITPNM3Q9BZ71 974 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ULBP1Q9BZM6 244 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 TRIM2Q9C040 744 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 FAM96AQ9H5X1 160 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 CATSPERBQ9H7T0 1116 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 LRRC40Q9H9A6 602 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 RMI1Q9H9A7 625 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 KCNJ16Q9NPI9 418 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 OLA1Q9NTK5 396 aaKnown RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 MRGBPQ9NV56 204 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ETNK2Q9NVF9 386 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 DDIT4Q9NX09 232 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 BFARQ9NZS9 450 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 TAAR2Q9P1P5 351 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ARMCX1Q9P291 453 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 HMGXB4Q9UGU5 601 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 IL36AQ9UHA7 158 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 DCDC2Q9UHG0 476 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 GRID1Q9ULK0 1009 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 GPR52Q9Y2T5 361 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ARL2BPQ9Y2Y0 163 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 HBS1LQ9Y450 684 aaKnown RBP3.03□□□□□ -1.92
SPG11-225ENST00000561391 TEX264Q9Y6I9 313 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 DYSFO75923 2080 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 ANK2Q01484 3957 aa3.03□□□□□ -1.92
SPG11-225ENST00000561391 BIRC6Q9NR09 4857 aa3.03□□□□□ -1.93
SPG11-225ENST00000561391 HCFC1P51610 2035 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 TCRBV9S1A1TA0A576 114 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 GXYLT2A0PJZ3 443 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 YJEFN3A6XGL0 299 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 E7ENQ6 273 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 GOLGA8MH3BSY2 632 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 EIF3FO00303 357 aaPredicted RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 CLDN4O14493 209 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 COPEO14579 308 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 SMAD6O43541 496 aaKnown RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 LDB2O43679 373 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 TYROBPO43914 113 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 SNX3O60493 162 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 PROP1O75360 226 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 GRAP2O75791 330 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 TOXO94900 526 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 ALDOAP04075 364 aaKnown RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 APOA4P06727 396 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 CD48P09326 243 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 FGF5P12034 268 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 NEFHP12036 1026 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 CCNB1P14635 433 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 ETS1P14921 441 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 PGAM1P18669 254 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 EPHB2P29323 1055 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 SPRP35270 261 aaPredicted RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 ELK3P41970 407 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 MAGEA3P43357 314 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 PCP4P48539 62 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 MNAT1P51948 309 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 SLC37A1P57057 533 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 FOXL2P58012 376 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 PROK1P58294 105 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 TPI1P60174 286 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 DCAF7P61962 342 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 ACTN3Q08043 901 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms