RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 DANCRP0C864 163 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 ERGP11308 486 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 ALOX12P18054 663 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 CHRM3P20309 590 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 TBXA2RP21731 343 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 USF1P22415 310 aaPredicted RBP4.79□□□□□ -1.64
HERC1-213ENST00000561359 FOXN2P32314 431 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 GCKP35557 465 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 HSD17B2P37059 387 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 COILP38432 576 aaPredicted RBP4.79□□□□□ -1.64
HERC1-213ENST00000561359 NR2C2P49116 596 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 CDK9P50750 372 aaKnown RBP4.79□□□□□ -1.64
HERC1-213ENST00000561359 CCR8P51685 355 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 UBXN1Q04323 297 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 ASPHQ12797 758 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 SPARCL1Q14515 664 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 PRPSAP1Q14558 356 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 POU6F1Q14863 301 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 ARHGAP19Q14CB8 494 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 NRF1Q16656 503 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 EIPR1Q53HC9 387 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.79□□□□□ -1.64
HERC1-213ENST00000561359 PTRHD1Q6GMV3 140 aaKnown RBP4.79□□□□□ -1.64
HERC1-213ENST00000561359 VWA1Q6PCB0 445 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 SCIMPQ6UWF3 145 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 CLEC17AQ6ZS10 378 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 P4HA3Q7Z4N8 544 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 CCDC50Q8IVM0 306 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 TMEM132CQ8N3T6 1108 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 TC2NQ8N9U0 490 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 ZNF740Q8NDX6 193 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 OR5L2Q8NGL0 311 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 RAB3IL1Q8TBN0 382 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 PAQR8Q8TEZ7 354 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 PPP1R14AQ96A00 147 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 MSI2Q96DH6 328 aaKnown RBP4.79□□□□□ -1.64
HERC1-213ENST00000561359 STARD4Q96DR4 205 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 TM4SF19Q96DZ7 209 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 ZNF597Q96LX8 424 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 ADAD1Q96M93 576 aaKnown RBP4.79□□□□□ -1.64
HERC1-213ENST00000561359 PANX2Q96RD6 677 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 TBL1YQ9BQ87 522 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 FERMT1Q9BQL6 677 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 TMEM204Q9BSN7 226 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 OR8D2Q9GZM6 311 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 ISCUQ9H1K1 167 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 GBA3Q9H227 469 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 TMEM184CQ9NVA4 438 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 ZNHIT6Q9NWK9 470 aaKnown RBP4.79□□□□□ -1.64
HERC1-213ENST00000561359 CGGBP1Q9UFW8 167 aaPredicted RBP4.79□□□□□ -1.64
HERC1-213ENST00000561359 ZNF148Q9UQR1 794 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 AAR2Q9Y312 384 aaKnown RBP4.79□□□□□ -1.64
HERC1-213ENST00000561359 FREM3P0C091 2139 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 NINQ8N4C6 2090 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 A0A0A6YYJ9 748 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 ANKRD34BA5PLL1 514 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 E7ENX8 843 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 SLCO1B7G3V0H7 640 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 MYO1CO00159 1063 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 CLGNO14967 610 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 NDUFS4O43181 175 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 LCMT2O60294 686 aaKnown RBP4.78□□□□□ -1.64
HERC1-213ENST00000561359 CEP104O60308 925 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 PROSCO94903 275 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 SLC16A8O95907 504 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 SYF2O95926 243 aaKnown RBP4.78□□□□□ -1.64
HERC1-213ENST00000561359 HPNP05981 417 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 DBHP09172 617 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 ZNF888P0CJ79 500 aaPredicted RBP4.78□□□□□ -1.64
HERC1-213ENST00000561359 PECAM1P16284 738 aaPredicted RBP4.78□□□□□ -1.64
HERC1-213ENST00000561359 CHMP24386 653 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 HRH2P25021 359 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 PSMB4P28070 264 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 PTPN6P29350 595 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 GRK3P35626 688 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 PPARGP37231 505 aaPredicted RBP4.78□□□□□ -1.64
HERC1-213ENST00000561359 MASP1P48740 699 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 NAGLUP54802 743 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 CORO7P57737 925 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 SIRPAP78324 504 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 KLHL30Q0D2K2 578 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 SLC13A2Q13183 592 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 EXOC3L2Q2M3D2 409 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 ZNF791Q3KP31 576 aaPredicted RBP4.78□□□□□ -1.64
HERC1-213ENST00000561359 AWAT1Q58HT5 328 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 PIGGQ5H8A4 983 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 NHSL2Q5HYW2 709 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 ITPRIPL1Q6GPH6 555 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 DENND5AQ6IQ26 1287 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 NIPAL1Q6NVV3 410 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 PAQR3Q6TCH7 311 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 KIAA1328Q86T90 577 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 GPSM1Q86YR5 675 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 AFAP1L2Q8N4X5 818 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 ZNF525Q8N782 197 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 SEMA6DQ8NFY4 1073 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 OR10G3Q8NGC4 313 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 KAT2AQ92830 837 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 NEUROG1Q92886 237 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 DAZLQ92904 295 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms