RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 GALNTL5Q7Z4T8 443 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 BCORP1Q8N888 145 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 TMEM178AQ8NBL3 297 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 MGARPQ8TDB4 240 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 ASB15Q8WXK1 588 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 TMEM125Q96AQ2 219 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 BRINP2Q9C0B6 783 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 ZNF395Q9H8N7 513 aaPredicted RBP18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 A8MVJ9 347 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 ITM2AO43736 263 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 SP1P08047 785 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 CSNK2A2P19784 350 aaPredicted RBP18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 BGNP21810 368 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 PRPH2P23942 346 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 SOX3P41225 446 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 GSTM5P46439 218 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 SLC37A1P57057 533 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 RPL38P63173 70 aaKnown RBP18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 C2orf80Q0P641 193 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 MRPL49Q13405 166 aaKnown RBP18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 KIAA0040Q15053 153 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 LTB4RQ15722 352 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 GALNTL6Q49A17 601 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 HHATQ5VTY9 493 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 SLC25A25Q6KCM7 469 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 RNF165Q6ZSG1 346 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 SLC29A4Q7RTT9 530 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 ZNF227Q86WZ6 799 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 LRRC25Q8N386 305 aaPredicted RBP18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 ADCY4Q8NFM4 1077 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 FAM76AQ8TAV0 307 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 FAR1Q8WVX9 515 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 SCMH1Q96GD3 660 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 CLMPQ9H6B4 373 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 MIEF1Q9NQG6 463 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 HPF1Q9NWY4 346 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 ERVK-11Q9UQG0 969 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 ENTPD4Q9Y227 616 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 LSM1O15116 133 aaKnown RBP18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 OR6B1O95007 311 aa18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 CLPSP04118 112 aa18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 ATP1B1P05026 303 aa18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 ABCE1P61221 599 aaKnown RBP18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 IL20RBQ6UXL0 311 aa18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 VWA5B2Q8N398 1253 aa18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 NUBPLQ8TB37 319 aa18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 TLCD1Q96CP7 247 aa18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 ZNF681Q96N22 645 aa18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 BARD1Q99728 777 aaKnown RBP18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 TRIM45Q9H8W5 580 aaPredicted RBP18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 MYNNQ9NPC7 610 aa18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 OLAHQ9NV23 265 aa18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 ARGLU1Q9NWB6 273 aaPredicted RBP18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 GIMAP2Q9UG22 337 aa18.46■□□□□ 0.55
TSPAN3-210ENST00000561277 RP1L1Q8IWN7 2480 aaPredicted RBP18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 ATP6AP2A0A1C7CYW4 349 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 TMEM114B3SHH9 223 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 NPIPB8E9PQR5 432 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 CDK2AP1O14519 115 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 ZNF354AO60765 605 aaPredicted RBP18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 ATP6AP2O75787 350 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 DDCP20711 480 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 TACR1P25103 407 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 EBPQ15125 230 aaKnown RBP18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 PRICKLE4Q2TBC4 344 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 FAM111BQ6SJ93 734 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 MDGA2Q7Z553 956 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 HOMEZQ8IX15 550 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 CCDC116Q8IYX3 515 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 ZNF781Q8N8C0 355 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 METTL2AQ96IZ6 378 aaKnown RBP18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 WWTR1Q9GZV5 400 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 GIMAP4Q9NUV9 329 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 MAT2BQ9NZL9 334 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 PCDHGB6Q9Y5F9 930 aa18.45■□□□□ 0.54
TSPAN3-210ENST00000561277 NME2P1O60361 137 aa18.44■□□□□ 0.54
TSPAN3-210ENST00000561277 NME2P22392 152 aa18.44■□□□□ 0.54
TSPAN3-210ENST00000561277 FUT7Q11130 342 aa18.44■□□□□ 0.54
TSPAN3-210ENST00000561277 RFTN2Q52LD8 501 aaPredicted RBP18.44■□□□□ 0.54
TSPAN3-210ENST00000561277 FAM71E1Q6IPT2 247 aa18.44■□□□□ 0.54
TSPAN3-210ENST00000561277 TICAM1Q8IUC6 712 aa18.44■□□□□ 0.54
TSPAN3-210ENST00000561277 EGLN2Q96KS0 407 aa18.44■□□□□ 0.54
TSPAN3-210ENST00000561277 C20orf27Q9GZN8 174 aa18.44■□□□□ 0.54
TSPAN3-210ENST00000561277 OR10A5Q9H207 317 aa18.44■□□□□ 0.54
TSPAN3-210ENST00000561277 SLC35C2Q9NQQ7 365 aa18.44■□□□□ 0.54
TSPAN3-210ENST00000561277 EHD3Q9NZN3 535 aa18.44■□□□□ 0.54
TSPAN3-210ENST00000561277 OR6C76A6NM76 312 aa18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 SDC1P18827 310 aa18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 GRK2P25098 689 aa18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 SLC1A6P48664 564 aa18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 WDR4P57081 412 aaKnown RBP18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 MRPS35P82673 323 aaKnown RBP18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 XKR7Q5GH72 579 aa18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 IKBIPQ70UQ0 350 aa18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 CLHC1Q8NHS4 586 aa18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.43■□□□□ 0.541e-7■■■□□ 17.5
TSPAN3-210ENST00000561277 SLC22A8Q8TCC7 542 aa18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 GFM2Q969S9 779 aaKnown RBP18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 ARL8AQ96BM9 186 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 342.9 ms