RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 MTURNQ8N3F0 131 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 CPSF7Q8N684 471 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 CCDC185Q8N715 623 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 BMPERQ8N8U9 685 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 DNAAF3Q8N9W5 541 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 KBTBD3Q8NAB2 608 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 KCNH5Q8NCM2 988 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 NPEPL1Q8NDH3 523 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 FBXL13Q8NEE6 735 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 TRPV1Q8NER1 839 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ACVR1CQ8NER5 493 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 OR1L4Q8NGR5 311 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 OR13F1Q8NGS4 319 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 TMEM163Q8TC26 289 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 LKAAEAR1Q8TD35 194 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 DTX3LQ8TDB6 740 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 LRRC15Q8TF66 581 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SCARB1Q8WTV0 552 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 GLYATL2Q8WU03 294 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 TMEM174Q8WUU8 243 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 OR1E3Q8WZA6 343 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 IRGQQ8WZA9 623 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 LPAR1Q92633 364 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 HAS1Q92839 578 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SLCO2A1Q92959 643 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 PIGTQ969N2 578 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 FUBP1Q96AE4 644 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 CCDC124Q96CT7 223 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 C10orf35Q96D05 121 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 BPIFA2Q96DR5 249 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 CERS2Q96G23 380 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SDSLQ96GA7 329 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 COQ2Q96H96 371 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 LURAP1Q96LR2 239 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SGK494Q96LW2 274 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 TGM7Q96PF1 710 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 DUX5Q96PT3 197 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 UHRF2Q96PU4 802 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 CYTH2Q99418 400 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SLC38A3Q99624 504 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 NAPGQ99747 312 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 SLC29A1Q99808 456 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SH3GL1Q99961 368 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 NEURL2Q9BR09 285 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ST6GALNAC5Q9BVH7 336 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 POLDIP3Q9BY77 421 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 MRPL37Q9BZE1 423 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 DRC3Q9H069 523 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ILKAPQ9H0C8 392 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 HDHD2Q9H0R4 259 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 MEGF9Q9H1U4 602 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 GAL3ST2Q9H3Q3 398 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 KLHL31Q9H511 634 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 AZI2Q9H6S1 392 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 GEMIN7Q9H840 131 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 PCDH9Q9HC56 1237 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ZFP14Q9HCL3 533 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 PHPT1Q9NRX4 125 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 THSD1Q9NS62 852 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SLC38A7Q9NVC3 462 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 QPCTLQ9NXS2 382 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 NKIRAS1Q9NYS0 192 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 WWOXQ9NZC7 414 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 KLRF1Q9NZS2 232 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 BFARQ9NZS9 450 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 PIPOXQ9P0Z9 390 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 IL36RNQ9UBH0 155 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 GNG12Q9UBI6 72 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 GHRLQ9UBU3 117 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 WNT16Q9UBV4 365 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 DAPK2Q9UIK4 370 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ZNF346Q9UL40 294 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 SLC7A7Q9UM01 511 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 FZR1Q9UM11 496 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 STUB1Q9UNE7 303 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 DIMT1Q9UNQ2 313 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 B9D1Q9UPM9 204 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 NIP7Q9Y221 180 aaKnown RBP eCLIP1.88□□□□□ -2.11
RTF1-207ENST00000561076 EXOGQ9Y2C4 368 aaKnown RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 ZNF175Q9Y473 711 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 PPIAL4AQ9Y536 164 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 OR1A2Q9Y585 309 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ATP6V1DQ9Y5K8 247 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 R4GN57 208 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 CUX2O14529 1486 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 CCDC7Q96M83 1385 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 TRAV25A0A0B4J276 109 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 CENPVL1A0A0U1RR11 272 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 A0A1W2PPK0 400 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 FEZF1A0PJY2 475 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ZNF503-AS2A6NEH8 195 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 CCDC182A6NF36 153 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 OR6C75A6NL08 312 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 LRRC30A6NM36 301 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 SERPINE3A8MV23 424 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ZNF732B4DXR9 585 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 FOXE1O00358 373 aaPredicted RBP1.87□□□□□ -2.11
RTF1-207ENST00000561076 FBP2O00757 339 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 DYNC1I1O14576 645 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 CCSO14618 274 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms