RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ESRRAP11474 423 aaPredicted RBP14.75□□□□□ -0.05
LMX1B-204ENST00000561065 CPA3P15088 417 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 ALOX15P16050 662 aaPredicted RBP14.75□□□□□ -0.05
LMX1B-204ENST00000561065 TSPAN8P19075 237 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 HTR1EP28566 365 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 DNAJB13P59910 316 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 ERVK-8P63133 956 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 ZNF630Q2M218 657 aaPredicted RBP14.75□□□□□ -0.05
LMX1B-204ENST00000561065 SPRED3Q2MJR0 410 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 UNC50Q53HI1 259 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 LETMD1Q6P1Q0 360 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 RTL4Q6ZR62 310 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 ST13P4Q8IZP2 240 aaPredicted RBP14.75□□□□□ -0.05
LMX1B-204ENST00000561065 MARVELD2Q8N4S9 558 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 NUBPLQ8TB37 319 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 FAM57AQ8TBR7 257 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 MZB1Q8WU39 189 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 TTTY12Q9BZ98 90 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 ZDHHC11Q9H8X9 412 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 FARSBQ9NSD9 589 aaKnown RBP14.75□□□□□ -0.05
LMX1B-204ENST00000561065 SENP1Q9P0U3 644 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 ZNF225Q9UK10 706 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 ERVK-19Q9WJR5 959 aa14.75□□□□□ -0.05
LMX1B-204ENST00000561065 OR10H2O60403 315 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 GLSO94925 669 aaPredicted RBP14.74□□□□□ -0.05
LMX1B-204ENST00000561065 OR4F21O95013 312 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 ESRRBO95718 433 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 PIK3R1P27986 724 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 DEKP35659 375 aaKnown RBP14.74□□□□□ -0.05
LMX1B-204ENST00000561065 DNASE1L1P49184 302 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 MAPK12P53778 367 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 TRA2BP62995 288 aaKnown RBP14.74□□□□□ -0.05
LMX1B-204ENST00000561065 FOXO1Q12778 655 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 CSTF3Q12996 717 aaKnown RBP14.74□□□□□ -0.05
LMX1B-204ENST00000561065 MPEG1Q2M385 716 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 METTL4Q8N3J2 472 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 RPRMLQ8N4K4 120 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 CDYL2Q8N8U2 506 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 EPS8L3Q8TE67 593 aaKnown RBP14.74□□□□□ -0.05
LMX1B-204ENST00000561065 AENQ8WTP8 325 aaKnown RBP14.74□□□□□ -0.05
LMX1B-204ENST00000561065 PHF10Q8WUB8 498 aaKnown RBP14.74□□□□□ -0.05
LMX1B-204ENST00000561065 SMC6Q96SB8 1091 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 CNPPD1Q9BV87 410 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 FAIM2Q9BWQ8 316 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 MRPL1Q9BYD6 325 aaKnown RBP14.74□□□□□ -0.05
LMX1B-204ENST00000561065 DEFB127Q9H1M4 99 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 SH2D2AQ9NP31 389 aa14.74□□□□□ -0.05
LMX1B-204ENST00000561065 GOLGA6L10A6NI86 522 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 E9PLN8 166 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 PGRMC2O15173 223 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 PDE9AO76083 593 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 PDYNP01213 254 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 KLK1P06870 262 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 TPOP07202 933 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 CT62P0C5K7 136 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 AGAP20933 346 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 GALNSP34059 522 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 PTGS2P35354 604 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 GSTM5P46439 218 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 SLC37A1P57057 533 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 PPIAP62937 165 aaKnown RBP14.73□□□□□ -0.05
LMX1B-204ENST00000561065 SLC18A2Q05940 514 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 EBPQ15125 230 aaKnown RBP14.73□□□□□ -0.05
LMX1B-204ENST00000561065 ZNF791Q3KP31 576 aaPredicted RBP14.73□□□□□ -0.05
LMX1B-204ENST00000561065 PIGGQ5H8A4 983 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 EMC4Q5J8M3 183 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 TCHHL1Q5QJ38 904 aaPredicted RBP14.73□□□□□ -0.05
LMX1B-204ENST00000561065 OR52E8Q6IFG1 317 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 XKRXQ6PP77 449 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 SAMD14Q8IZD0 417 aaPredicted RBP14.73□□□□□ -0.05
LMX1B-204ENST00000561065 MMP21Q8N119 569 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 GOLM1Q8NBJ4 401 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 OR4K14Q8NGD5 310 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 TMEM237Q96Q45 408 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 HBEGFQ99075 208 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 VKORC1Q9BQB6 163 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 TRMOQ9BU70 441 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 PARD6BQ9BYG5 372 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 WWTR1Q9GZV5 400 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 OXSMQ9NWU1 459 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 PDZD2O15018 2839 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 CREBBPQ92793 2442 aa14.73□□□□□ -0.05
LMX1B-204ENST00000561065 C1orf226A1L170 272 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 MANBAO00462 879 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 PRRG2O14669 202 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 PLIN3O60664 434 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 PROCP04070 461 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 CELA3AP09093 270 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 SLC35E2P0CK97 266 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 SSTR4P31391 388 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 NAGLUP54802 743 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 PLGLB1Q02325 96 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 GALNT1Q10472 559 aaPredicted RBP14.72□□□□□ -0.05
LMX1B-204ENST00000561065 ZNF267Q14586 743 aaPredicted RBP14.72□□□□□ -0.05
LMX1B-204ENST00000561065 ERCC6LQ2NKX8 1250 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 SPIN4Q56A73 249 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 LIPMQ5VYY2 423 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 OPN5Q6U736 354 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 SH2D5Q6ZV89 423 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 MCEMP1Q8IX19 187 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms