RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 ELP5Q8TE02 316 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 XAGE5Q8WWM1 108 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 CTHRC1Q96CG8 243 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 TTC25Q96NG3 672 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 TRIB3Q96RU7 358 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 PRR25Q96S07 402 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 SELENOSQ9BQE4 189 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 C11orf70Q9BRQ4 267 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 CCM2Q9BSQ5 444 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 CNPY3Q9BT09 278 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 RBM24Q9BX46 236 aaKnown RBP3.41□□□□□ -1.86
HERC1-211ENST00000560983 TRIM54Q9BYV2 358 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 TTTY12Q9BZ98 90 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 XPO4Q9C0E2 1151 aaKnown RBP3.41□□□□□ -1.86
HERC1-211ENST00000560983 VN1R1Q9GZP7 353 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 CLSTN2Q9H4D0 955 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 MVB12BQ9H7P6 319 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 MAGEE1Q9HCI5 957 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 BPIFA1Q9NP55 256 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 NT5MQ9NPB1 228 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 MKKSQ9NPJ1 570 aaPredicted RBP3.41□□□□□ -1.86
HERC1-211ENST00000560983 ETNK2Q9NVF9 386 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 C14orf105Q9NVL8 296 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 OR6C2Q9NZP2 312 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 NDRG3Q9UGV2 375 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 SMC3Q9UQE7 1217 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 LRP12Q9Y561 859 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 PCDHGB3Q9Y5G1 929 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 NFS1Q9Y697 457 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 A0A0G2JMM0 328 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 A0A1W2PPB8 328 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 A0A1W2PRS3 328 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 FAM234BA2RU67 622 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 C2orf81A6NN90 581 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 KIR3DP1A8MWS1 328 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 ISM1B1AKI9 464 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 EEF1E1-BLOC1S5C9J1V9 151 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 M0R3H8 397 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 UBFD1O14562 309 aaKnown RBP3.4□□□□□ -1.87
HERC1-211ENST00000560983 CCP110O43303 1012 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 EEF1E1O43324 174 aaKnown RBP3.4□□□□□ -1.87
HERC1-211ENST00000560983 PRPSAP2O60256 369 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 OR10H2O60403 315 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 PLAUP00749 431 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 IGHV4-39P01824 125 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 KRT3P12035 628 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 MMP8P22894 467 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 SHMT2P34897 504 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 PCK1P35558 622 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 MAGEA5P43359 124 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 CD151P48509 253 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 HCAR3P49019 387 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 MAT1AQ00266 395 aaKnown RBP3.4□□□□□ -1.87
HERC1-211ENST00000560983 FAM27E3Q08E93 113 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 GALNT2Q10471 571 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 PTP4A2Q12974 167 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 KIR2DS3Q14952 304 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 SLC10A1Q14973 349 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 PRTGQ2VWP7 1150 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 ACSF3Q4G176 576 aaPredicted RBP3.4□□□□□ -1.87
HERC1-211ENST00000560983 BCL7AQ4VC05 210 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 CCDC38Q502W7 563 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 AWAT1Q58HT5 328 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 LDLRAP1Q5SW96 308 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 DEPDC1Q5TB30 811 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 NAA35Q5VZE5 725 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 TRIM65Q6PJ69 517 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 PLXDC2Q6UX71 529 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 CAND1Q86VP6 1230 aaKnown RBP3.4□□□□□ -1.87
HERC1-211ENST00000560983 BBS5Q8N3I7 341 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 ZNF611Q8N823 705 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 LINC01555Q8NAE3 123 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 OR2M7Q8NG81 312 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 OR5AR1Q8NGP9 310 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 PRSS3P2Q8NHM4 247 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 METTL21AQ8WXB1 218 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 MAML1Q92585 1016 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 TFGQ92734 400 aaPredicted RBP3.4□□□□□ -1.87
HERC1-211ENST00000560983 ZNF653Q96CK0 615 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 C1GALT1C1Q96EU7 318 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 PKP2Q99959 881 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 HGH1Q9BTY7 390 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 RAB11FIP5Q9BXF6 653 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 POLR1EQ9GZS1 481 aaKnown RBP3.4□□□□□ -1.87
HERC1-211ENST00000560983 EML4Q9HC35 981 aaKnown RBP3.4□□□□□ -1.87
HERC1-211ENST00000560983 KLHL28Q9NXS3 571 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 CWC15Q9P013 229 aaKnown RBP3.4□□□□□ -1.87
HERC1-211ENST00000560983 PCDHA7Q9UN72 937 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 LAMP3Q9UQV4 416 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 DRG1Q9Y295 367 aaKnown RBP3.4□□□□□ -1.87
HERC1-211ENST00000560983 PCDHGB1Q9Y5G3 927 aa3.4□□□□□ -1.87
HERC1-211ENST00000560983 CPAMD8Q8IZJ3 1885 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 ATP6AP2A0A1C7CYW4 349 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 FAM90A10PA6NDY2 464 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 SIGLEC16A6NMB1 481 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 A8MXE2 369 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 EPHB6O15197 1021 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 HCN1O60741 890 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 ATP6AP2O75787 350 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 IL33O95760 270 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms