RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 MYBPC3Q14896 1274 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 CRB2Q5IJ48 1285 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 DCAF10Q5QP82 559 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 NDUFAF5Q5TEU4 345 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 MLIPQ5VWP3 458 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 FAM219BQ5XKK7 198 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 FAM71E1Q6IPT2 247 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 GK5Q6ZS86 529 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 TTLL10Q6ZVT0 673 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 UBE3DQ7Z6J8 389 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 TREML1Q86YW5 311 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 GALNT16Q8N428 558 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 KRTCAP2Q8N6L1 136 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 OR8J2Q8NGG1 315 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 OR9I1Q8NGQ6 314 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 TANKQ92844 425 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 TM4SF18Q96CE8 201 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 MMABQ96EY8 250 aaPredicted RBP11.06□□□□□ -0.64
LDLR-212ENST00000560467 C11orf24Q96F05 449 aaPredicted RBP11.06□□□□□ -0.64
LDLR-212ENST00000560467 ZNF285Q96NJ3 590 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 BBS4Q96RK4 519 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 HOPXQ9BPY8 73 aaPredicted RBP11.06□□□□□ -0.64
LDLR-212ENST00000560467 BTBD10Q9BSF8 475 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 SORBS1Q9BX66 1292 aaKnown RBP11.06□□□□□ -0.64
LDLR-212ENST00000560467 BHLHE41Q9C0J9 482 aaPredicted RBP11.06□□□□□ -0.64
LDLR-212ENST00000560467 SPRTNQ9H040 489 aaPredicted RBP11.06□□□□□ -0.64
LDLR-212ENST00000560467 C1orf21Q9H246 121 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 ZNF552Q9H707 407 aaPredicted RBP11.06□□□□□ -0.64
LDLR-212ENST00000560467 ZBTB20Q9HC78 741 aaPredicted RBP11.06□□□□□ -0.64
LDLR-212ENST00000560467 ATP6V1HQ9UI12 483 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 AP3M1Q9Y2T2 418 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 PTRH2Q9Y3E5 179 aaKnown RBP11.06□□□□□ -0.64
LDLR-212ENST00000560467 PCDHGA10Q9Y5H3 936 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 A0A0A6YYC8 382 aaPredicted RBP11.05□□□□□ -0.64
LDLR-212ENST00000560467 C15orf38-AP3S2A0A0A6YYH1 394 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 GABRR3A8MPY1 467 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 I3L1I5 382 aaPredicted RBP11.05□□□□□ -0.64
LDLR-212ENST00000560467 SEC16AO15027 2179 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 P2RX6O15547 441 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 ERN1O75460 977 aaKnown RBP11.05□□□□□ -0.64
LDLR-212ENST00000560467 NSA2O95478 260 aaKnown RBP11.05□□□□□ -0.64
LDLR-212ENST00000560467 ALPPP05187 535 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 CTSBP07858 339 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 SMIM10L1P0DMW3 83 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 RNH1P13489 461 aaKnown RBP11.05□□□□□ -0.64
LDLR-212ENST00000560467 IL1RNP18510 177 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 CERS1P27544 350 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 MPIP34949 423 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 CPA2P48052 419 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 BIKQ13323 160 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 ELOAQ14241 798 aaKnown RBP11.05□□□□□ -0.64
LDLR-212ENST00000560467 SPANXN4Q5MJ08 99 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 OR52E8Q6IFG1 317 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 IGFL3Q6UXB1 125 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 PPP1R32Q7Z5V6 425 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 ARPINQ7Z6K5 226 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 CLEC1AQ8NC01 280 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 OR9A4Q8NGU2 314 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 VPS33AQ96AX1 596 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 RCN3Q96D15 328 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 ZBED6CLQ96FA7 236 aaPredicted RBP11.05□□□□□ -0.64
LDLR-212ENST00000560467 SMIM10Q96HG1 83 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 EGLN2Q96KS0 407 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 GBP5Q96PP8 586 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 PANX1Q96RD7 426 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 DPH2Q9BQC3 489 aaPredicted RBP11.05□□□□□ -0.64
LDLR-212ENST00000560467 MMADHCQ9H3L0 296 aaPredicted RBP11.05□□□□□ -0.64
LDLR-212ENST00000560467 P4HTMQ9NXG6 502 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 L3MBTL1Q9Y468 752 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 CSAG2Q9Y5P2 127 aa11.05□□□□□ -0.64
LDLR-212ENST00000560467 PCM1Q15154 2024 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 A0A1B0GX78 115 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 A0A1W2PRB8 838 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 SYNDIG1LA6NDD5 238 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 CFAP73A6NFT4 308 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 EVPLLA8MZ36 301 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 SGK494L7N484 410 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 PEX12O00623 359 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 RFXANKO14593 260 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 DSCR3O14972 297 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 ANKRD28O15084 1053 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 PROM1O43490 865 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 CHST10O43529 356 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 TMPRSS11DO60235 418 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 TBX19O60806 448 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 ALOX12BO75342 701 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 GMNNO75496 209 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 TBX6O95947 436 aaPredicted RBP11.04□□□□□ -0.64
LDLR-212ENST00000560467 UMODP07911 640 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 PRF1P14222 555 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 GPC1P35052 558 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 FOLR3P41439 243 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 TRPC1P48995 793 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 DGKQP52824 942 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 MANFP55145 182 aaKnown RBP11.04□□□□□ -0.64
LDLR-212ENST00000560467 LIM2P55344 173 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 C6orf163Q5TEZ5 329 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 REP15Q6BDI9 236 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 BHLHB9Q6PI77 547 aa11.04□□□□□ -0.64
LDLR-212ENST00000560467 HACD2Q6Y1H2 254 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms