RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 CLEC17AQ6ZS10 378 aa5.73□□□□□ -1.49
HERC1-208ENST00000560462 LILRA2Q8N149 483 aa5.73□□□□□ -1.49
HERC1-208ENST00000560462 LMNTD1Q8N9Z9 388 aa5.73□□□□□ -1.49
HERC1-208ENST00000560462 ZNF540Q8NDQ6 660 aa5.73□□□□□ -1.49
HERC1-208ENST00000560462 TAF15Q92804 592 aaKnown RBP eCLIP5.73□□□□□ -1.49
HERC1-208ENST00000560462 HOXB13Q92826 284 aaPredicted RBP5.73□□□□□ -1.49
HERC1-208ENST00000560462 JSRP1Q96MG2 331 aaPredicted RBP5.73□□□□□ -1.49
HERC1-208ENST00000560462 DUX5Q96PT3 197 aa5.73□□□□□ -1.49
HERC1-208ENST00000560462 RASL10BQ96S79 203 aa5.73□□□□□ -1.49
HERC1-208ENST00000560462 CCDC77Q9BR77 488 aa5.73□□□□□ -1.49
HERC1-208ENST00000560462 BPESC1Q9GZL8 116 aa5.73□□□□□ -1.49
HERC1-208ENST00000560462 DHX35Q9H5Z1 703 aaKnown RBP5.73□□□□□ -1.49
HERC1-208ENST00000560462 LIN28AQ9H9Z2 209 aaKnown RBP5.73□□□□□ -1.49
HERC1-208ENST00000560462 CBLN4Q9NTU7 201 aa5.73□□□□□ -1.49
HERC1-208ENST00000560462 PNPOQ9NVS9 261 aa5.73□□□□□ -1.49
HERC1-208ENST00000560462 SYBUQ9NX95 663 aa5.73□□□□□ -1.49
HERC1-208ENST00000560462 ADAM22Q9P0K1 906 aa5.73□□□□□ -1.49
HERC1-208ENST00000560462 GRIP1Q9Y3R0 1128 aa5.73□□□□□ -1.49
HERC1-208ENST00000560462 PLXNB1O43157 2135 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 A0A1B0GUS0 222 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 LOC390937A0A1W2PQ73 354 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 H0Y3Z8 333 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 H3BUI4 141 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 TXNDC9O14530 226 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 APOL1O14791 398 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 SKAP2O75563 359 aaPredicted RBP5.72□□□□□ -1.49
HERC1-208ENST00000560462 TRAPPC6AO75865 159 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 NSA2O95478 260 aaKnown RBP5.72□□□□□ -1.49
HERC1-208ENST00000560462 MMP2P08253 660 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 H2AFB1P0C5Y9 115 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 H2AFB2P0C5Z0 115 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 PRSS56P0CW18 603 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 RALBP11234 206 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 GPD1P21695 349 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 OMGP23515 440 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 CHMP24386 653 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 HMGCLP35914 325 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 HSPA7P48741 367 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 KIR3DS1Q14943 382 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 NR1I3Q14994 352 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 SLC39A14Q15043 492 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 NOMO1Q15155 1222 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 ZNF658BQ4V348 819 aaPredicted RBP5.72□□□□□ -1.49
HERC1-208ENST00000560462 DMRTC1Q5HYR2 192 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 INTS11Q5TA45 600 aaKnown RBP5.72□□□□□ -1.49
HERC1-208ENST00000560462 TEPPQ6URK8 271 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 PRSS41Q7RTY9 318 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 ZDHHC13Q8IUH4 622 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 GRAMD2AQ8IUY3 354 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 CEP57L1Q8IYX8 460 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 B3GNT7Q8NFL0 401 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 MUC7Q8TAX7 377 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 ABTB1Q969K4 478 aaPredicted RBP5.72□□□□□ -1.49
HERC1-208ENST00000560462 RERGQ96A58 199 aaPredicted RBP5.72□□□□□ -1.49
HERC1-208ENST00000560462 TMIGD2Q96BF3 282 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 DCUN1D1Q96GG9 259 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 ZNF845Q96IR2 970 aaPredicted RBP5.72□□□□□ -1.49
HERC1-208ENST00000560462 CLPTM1LQ96KA5 538 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 MRGPRX4Q96LA9 322 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 TMEM120AQ9BXJ8 343 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 ACTR6Q9GZN1 396 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 VPS37BQ9H9H4 285 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 LANCL2Q9NS86 450 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 HIF1ANQ9NWT6 349 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 CLCF1Q9UBD9 225 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 MOKQ9UQ07 419 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 SMC3Q9UQE7 1217 aa5.72□□□□□ -1.49
HERC1-208ENST00000560462 DNAH9Q9NYC9 4486 aa5.71□□□□□ -1.49
HERC1-208ENST00000560462 LOC105371242A0A075B767 164 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 OR2A25A4D2G3 310 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 DNAJC9-AS1A6NH13 148 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 A8MUA0 341 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 B4DSR2 109 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 WWP2O00308 870 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 LIASO43766 372 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 ZFAND5O76080 213 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 LSM8O95777 96 aaKnown RBP5.71□□□□□ -1.5
HERC1-208ENST00000560462 CGAP01215 116 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 HPXP02790 462 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 CD8BP10966 210 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 KRT3P12035 628 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 CPN1P15169 458 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 IL10P22301 178 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 PSMB5P28074 263 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 ACADLP28330 430 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 SLC7A1P30825 629 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 CDH11P55287 796 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 C21orf58P58505 322 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 SIRPAP78324 504 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 BSPH1Q075Z2 132 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 PMS2P11Q13670 270 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 PIGHQ14442 188 aaPredicted RBP5.71□□□□□ -1.5
HERC1-208ENST00000560462 BECN1Q14457 450 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 CYP1B1Q16678 543 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 MAN2A1Q16706 1144 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 ZSWIM7Q19AV6 140 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 MPEG1Q2M385 716 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 PPP6R3Q5H9R7 873 aaPredicted RBP5.71□□□□□ -1.5
HERC1-208ENST00000560462 OR2A2Q6IF42 318 aa5.71□□□□□ -1.5
HERC1-208ENST00000560462 TMCO3Q6UWJ1 677 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms