RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 LRFN4Q6PJG9 635 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 OR51G2Q8NGK0 314 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 NAT6Q93015 286 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 PITX2Q99697 317 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 DCSTAMPQ9H295 470 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 KCNK12Q9HB15 430 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 SOCS2O14508 198 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 FGF3P11487 239 aaPredicted RBP12.85□□□□□ -0.35
TRAF3-208ENST00000560371 PRKCAP17252 672 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 VAMP1P23763 118 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 GNG2P59768 71 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 CLCA4Q14CN2 919 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 UGT3A2Q3SY77 523 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 CES4AQ5XG92 561 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 SLITRK4Q8IW52 837 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 HS6ST2Q96MM7 605 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 TMX2-CTNND1H3BSU7 103 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 PRAMEF2O60811 474 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 CLPXO76031 633 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 SIM1P81133 766 aaPredicted RBP12.85□□□□□ -0.35
TRAF3-208ENST00000560371 ST3GAL4Q11206 333 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 MALLQ13021 153 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 MPP2Q14168 576 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 UNC50Q53HI1 259 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 DKK3Q9UBP4 350 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 NPIPB15A6NHN6 443 aaPredicted RBP12.85□□□□□ -0.35
TRAF3-208ENST00000560371 MRPL3P09001 348 aaKnown RBP12.85□□□□□ -0.35
TRAF3-208ENST00000560371 CD38P28907 300 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 GRB7Q14451 532 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 GINS1Q14691 196 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 SCD5Q86SK9 330 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 PAQR7Q86WK9 346 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 OR14L1PQ8NHC6 308 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 CCDC59Q9P031 241 aaKnown RBP12.85□□□□□ -0.35
TRAF3-208ENST00000560371 SARDHQ9UL12 918 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 PCDHGB6Q9Y5F9 930 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 PEX14O75381 377 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 PVALBP20472 110 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 CD6P30203 668 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 MLLT10P55197 1068 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 MRPS21P82921 87 aaKnown RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 DLX2Q07687 328 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 CRYZQ08257 329 aaKnown RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 SEC23BQ15437 767 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 HMGN2P46Q86SG4 172 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 ZUFSPQ96AP4 578 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 ZNF285Q96NJ3 590 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 PARPBPQ9NWS1 579 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 RPH3AQ9Y2J0 694 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 TMEM14AQ9Y6G1 99 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 CDH10Q9Y6N8 788 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 A6NL46 340 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 BRINP1O60477 761 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 GLP1RP43220 463 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 TAS2R38P59533 333 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 RPS26P62854 115 aaKnown RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 LIX1LQ8IVB5 337 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 RLN3Q8WXF3 142 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 CLSTN3Q9BQT9 956 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 ZNF576Q9H609 170 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 ITGB1BP2Q9UKP3 347 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 ACAD8Q9UKU7 415 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 SIT1Q9Y3P8 196 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 ARID1AO14497 2285 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 ZNF28P17035 718 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 FOLR3P41439 243 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 NR0B2Q15466 257 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 OR4D1Q15615 310 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 NLGN4YQ8NFZ3 816 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 OR5AR1Q8NGP9 310 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 PROKR1Q8TCW9 393 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 CCNL2Q96S94 520 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 KLF16Q9BXK1 252 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 RBM34P42696 430 aaKnown RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 WNT7BP56706 349 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 FIZ1Q96SL8 496 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 MAP3K3Q99759 626 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 PCDH10Q9P2E7 1040 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 LOC100509620A0A075B734 347 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 KIR2DS5A0A0G2JLQ3 304 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 A0A0G2JNG1 304 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 DPPA5A6NC42 116 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 KIR2DS3K7RE56 304 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 ERCC1P07992 297 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 KIR2DS5Q14953 304 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 MEDAGQ5VYS4 303 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 TRMT2BQ96GJ1 504 aaKnown RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 BARD1Q99728 777 aaKnown RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 ITPAQ9BY32 194 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 TRPV4Q9HBA0 871 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 SRA1Q9HD15 236 aaKnown RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 MED11Q9P086 117 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 TMPRSS11EQ9UL52 423 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 FARSAQ9Y285 508 aaKnown RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 PKD1L3Q7Z443 1732 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 ESPL1Q14674 2120 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 OTOL1A6NHN0 477 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-208ENST00000560371 ACADVLP49748 655 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 ARG2P78540 354 aa12.84□□□□□ -0.35
TRAF3-208ENST00000560371 FGL2Q14314 439 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms