RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 ANGPTL8Q6UXH0 198 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 TMEM64Q6YI46 380 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 GLRX5Q86SX6 157 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 SERPINA11Q86U17 422 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 DHFR2Q86XF0 187 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 PTRH1Q86Y79 214 aaKnown RBP10.53□□□□□ -0.72
USP3-218ENST00000560202 ST13P4Q8IZP2 240 aaPredicted RBP10.53□□□□□ -0.72
USP3-218ENST00000560202 HIPK4Q8NE63 616 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 OR52N2Q8NGI0 321 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 OR1F2PQ96R84 312 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 CMKLR1Q99788 373 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 CTRCQ99895 268 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 TMEM121BQ9BXQ6 578 aaPredicted RBP10.53□□□□□ -0.72
USP3-218ENST00000560202 PRTFDC1Q9NRG1 225 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 GPATCH2Q9NW75 528 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 AKAP7Q9P0M2 348 aaPredicted RBP10.53□□□□□ -0.72
USP3-218ENST00000560202 TRPC4Q9UBN4 977 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 BCAP29Q9UHQ4 241 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 OTOGLQ3ZCN5 2332 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 MYOCOSA0A1B0GUC4 107 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.53□□□□□ -0.72
USP3-218ENST00000560202 ELOVL7A1L3X0 281 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 TMX2-CTNND1H3BSU7 103 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 JRKO75564 520 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 PSMG1O95456 288 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 STAMBPO95630 424 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 ATP1B1P05026 303 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 IL10P22301 178 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 CRATP43155 626 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 ERFP50548 548 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 HSD17B7P56937 341 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 BTG2P78543 158 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 VAC14Q08AM6 782 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 LSAMPQ13449 338 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 LTB4RQ15722 352 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 CYP51A1Q16850 503 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 ISXQ2M1V0 245 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.53□□□□□ -0.72
USP3-218ENST00000560202 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.53□□□□□ -0.72
USP3-218ENST00000560202 RNF220Q5VTB9 566 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 CDCP2Q5VXM1 449 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 TMEM107Q6UX40 140 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 MED25Q71SY5 747 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 C6orf120Q7Z4R8 191 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 RNF130Q86XS8 419 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 SLC38A9Q8NBW4 561 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 BHLHE22Q8NFJ8 381 aaPredicted RBP10.53□□□□□ -0.72
USP3-218ENST00000560202 ADCY4Q8NFM4 1077 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 TNIP2Q8NFZ5 429 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 CLIP3Q96DZ5 547 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 ELP4Q96EB1 424 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 NEURL3Q96EH8 262 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 RNF31Q96EP0 1072 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 REXO5Q96IC2 774 aaKnown RBP10.53□□□□□ -0.72
USP3-218ENST00000560202 STRADBQ9C0K7 418 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 MUC13Q9H3R2 512 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 RAD21L1Q9H4I0 556 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 FBXO8Q9NRD0 319 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 LANCL2Q9NS86 450 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 ZCCHC3Q9NUD5 404 aaKnown RBP10.53□□□□□ -0.72
USP3-218ENST00000560202 ACTR3BQ9P1U1 418 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 SNX13Q9Y5W8 968 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 SPEGQ15772 3267 aa10.53□□□□□ -0.72
USP3-218ENST00000560202 ASCC3Q8N3C0 2202 aaKnown RBP10.52□□□□□ -0.73
USP3-218ENST00000560202 B4E171 279 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 ARPC2O15144 300 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 EMC8O43402 210 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 KCNK5O95279 499 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 SLC35E2P0CK97 266 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 NCK1P16333 377 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 TSPAN7P41732 249 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 MC3RP41968 323 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 RANBP1P43487 201 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 CASP9P55211 416 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 IGLV3-21P80748 117 aaPredicted RBP10.52□□□□□ -0.73
USP3-218ENST00000560202 STX4Q12846 297 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 FADDQ13158 208 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 RCN1Q15293 331 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 COX20Q5RI15 118 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 CPZQ66K79 652 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 BHLHB9Q6PI77 547 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 CYP2R1Q6VVX0 501 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 PROSER1Q86XN7 944 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 MICU2Q8IYU8 434 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 DEFB124Q8NES8 71 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 SFXN5Q8TD22 340 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 JADE3Q92613 823 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 KAT2AQ92830 837 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 MOAP1Q96BY2 351 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 MAGED4Q96JG8 741 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 LRGUKQ96M69 825 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 SPATA9Q9BWV2 254 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 CHST8Q9H2A9 424 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 C3orf14Q9HBI5 128 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 MKKSQ9NPJ1 570 aaPredicted RBP10.52□□□□□ -0.73
USP3-218ENST00000560202 SLC22A11Q9NSA0 550 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 RAPGEFL1Q9UHV5 662 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 MAGEL2Q9UJ55 1249 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 MMACHCQ9Y4U1 282 aa10.52□□□□□ -0.73
USP3-218ENST00000560202 OR2W5A6NFC9 320 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms