RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 OR52E8Q6IFG1 317 aa16.33■□□□□ 0.2
HDDC3-205ENST00000559898 METTL2BQ6P1Q9 378 aaKnown RBP16.33■□□□□ 0.2
HDDC3-205ENST00000559898 PRR22Q8IZ63 422 aa16.33■□□□□ 0.2
HDDC3-205ENST00000559898 GOLM1Q8NBJ4 401 aa16.33■□□□□ 0.2
HDDC3-205ENST00000559898 PAQR8Q8TEZ7 354 aa16.33■□□□□ 0.2
HDDC3-205ENST00000559898 MZB1Q8WU39 189 aa16.33■□□□□ 0.2
HDDC3-205ENST00000559898 PHF10Q8WUB8 498 aaKnown RBP16.33■□□□□ 0.2
HDDC3-205ENST00000559898 SPACA9Q96E40 222 aaPredicted RBP16.33■□□□□ 0.2
HDDC3-205ENST00000559898 C1QTNF3Q9BXJ4 246 aa16.33■□□□□ 0.2
HDDC3-205ENST00000559898 IL1RL2Q9HB29 575 aa16.33■□□□□ 0.2
HDDC3-205ENST00000559898 SPRR3Q9UBC9 169 aa16.33■□□□□ 0.2
HDDC3-205ENST00000559898 CNOT11Q9UKZ1 510 aaKnown RBP16.33■□□□□ 0.2
HDDC3-205ENST00000559898 RNF6Q9Y252 685 aa16.33■□□□□ 0.2
HDDC3-205ENST00000559898 KIAA1549Q9HCM3 1950 aa16.33■□□□□ 0.2
HDDC3-205ENST00000559898 IQANK1A0A1B0GTG1 560 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 A0A1W2PPM1 405 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 SYNDIG1LA6NDD5 238 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 KDM4EB2RXH2 506 aaPredicted RBP16.32■□□□□ 0.2
HDDC3-205ENST00000559898 P04436 131 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 FBXO45P0C2W1 286 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 COX6B1P14854 86 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 XKP51811 444 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 FBXW4P57775 412 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 MGAT2Q10469 447 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 IFT88Q13099 833 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 ZNF678Q5SXM1 525 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 CCNYL2Q5T2Q4 361 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 ARHGAP11AQ6P4F7 1023 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 TIFABQ6ZNK6 161 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 TRILQ7L0X0 811 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 TAOK1Q7L7X3 1001 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 ZNF615Q8N8J6 731 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 CDYL2Q8N8U2 506 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 FAM13CQ8NE31 585 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 SELENOMQ8WWX9 145 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 TM4SF18Q96CE8 201 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 KCNA7Q96RP8 456 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 TSPYL1Q9H0U9 437 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 C12orf65Q9H3J6 166 aaKnown RBP16.32■□□□□ 0.2
HDDC3-205ENST00000559898 FAM215AQ9Y5M1 114 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.32■□□□□ 0.2
HDDC3-205ENST00000559898 MYO9AB2RTY4 2548 aa16.32■□□□□ 0.2
HDDC3-205ENST00000559898 IGHG3P01860 377 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 ABHD2P08910 425 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 CNTFP26441 200 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 PIK3R1P27986 724 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 FEN1P39748 380 aaKnown RBP16.31■□□□□ 0.2
HDDC3-205ENST00000559898 RAE1P78406 368 aaKnown RBP16.31■□□□□ 0.2
HDDC3-205ENST00000559898 CLCQ05315 142 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 PMPCAQ10713 525 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 SLC29A2Q14542 456 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 EXOSC7Q15024 291 aaKnown RBP16.31■□□□□ 0.2
HDDC3-205ENST00000559898 LTB4RQ15722 352 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 NNATQ16517 81 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 SLC22A10Q63ZE4 541 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 SCIMPQ6UWF3 145 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 GK5Q6ZS86 529 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 SLC29A4Q7RTT9 530 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 SLC22A16Q86VW1 577 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 FAM109AQ8N4B1 249 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 C1orf52Q8N6N3 182 aaKnown RBP16.31■□□□□ 0.2
HDDC3-205ENST00000559898 ADCY4Q8NFM4 1077 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 SLC22A8Q8TCC7 542 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 ADIPOR1Q96A54 375 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 SGCZQ96LD1 299 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 SMC6Q96SB8 1091 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 SLC6A15Q9H2J7 730 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 ELOVL6Q9H5J4 265 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 ANKRA2Q9H9E1 313 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 CHST11Q9NPF2 352 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 NPDC1Q9NQX5 325 aaPredicted RBP16.31■□□□□ 0.2
HDDC3-205ENST00000559898 HEY2Q9UBP5 337 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 TBK1Q9UHD2 729 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 EMCNQ9ULC0 261 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 TMCO1Q9UM00 188 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 PCDHA9Q9Y5H5 950 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 CREBBPQ92793 2442 aa16.31■□□□□ 0.2
HDDC3-205ENST00000559898 ARHGAP21Q5T5U3 1957 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 FAM90A27PA6NNH2 459 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 ACOT7O00154 380 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 MANBAO00462 879 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 SUPT7LO94864 414 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 SHBGP04278 402 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 CPMP14384 443 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 NT5EP21589 574 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 MAPK12P53778 367 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 FUT7Q11130 342 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 PRSS53Q2L4Q9 553 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 HYAL4Q2M3T9 481 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 ZNF585AQ6P3V2 769 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 GALNT12Q8IXK2 581 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 FBXW8Q8N3Y1 598 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 OR4K14Q8NGD5 310 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 ART5Q96L15 291 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 JSRP1Q96MG2 331 aaPredicted RBP16.3■□□□□ 0.2
HDDC3-205ENST00000559898 OR10A5Q9H207 317 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 TP63Q9H3D4 680 aaPredicted RBP16.3■□□□□ 0.2
HDDC3-205ENST00000559898 ZNF703Q9H7S9 590 aaPredicted RBP16.3■□□□□ 0.2
HDDC3-205ENST00000559898 WDR41Q9HAD4 459 aa16.3■□□□□ 0.2
HDDC3-205ENST00000559898 TIMM22Q9Y584 194 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms