RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 VAPAQ9P0L0 249 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 NXT1Q9UKK6 140 aaKnown RBP9.77□□□□□ -0.85
TPM1-221ENST00000559831 ACSL6Q9UKU0 697 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 PCDHB14Q9Y5E9 798 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 PCDHGA7Q9Y5G6 932 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 CLDN16Q9Y5I7 305 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 SPEGQ15772 3267 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 IGKV3D-11A0A0A0MRZ8 115 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 TCRBV16S1A1N1A0A5B0 115 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 C17orf105B2RV13 164 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 FXYD1O00168 92 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 NPPAP01160 153 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 ATP1B1P05026 303 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 CT62P0C5K7 136 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 UQCRC2P22695 453 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 PTPN6P29350 595 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 DLSTP36957 453 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 MC3RP41968 323 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 CCT3P49368 545 aaKnown RBP9.76□□□□□ -0.85
TPM1-221ENST00000559831 PGDP52209 483 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 PRKAG1P54619 331 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 OR4D2P58180 307 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 MTPNP58546 118 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 RPS18P62269 152 aaKnown RBP9.76□□□□□ -0.85
TPM1-221ENST00000559831 RPS15P62841 145 aaKnown RBP9.76□□□□□ -0.85
TPM1-221ENST00000559831 MRPS35P82673 323 aaKnown RBP9.76□□□□□ -0.85
TPM1-221ENST00000559831 BIKQ13323 160 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 CAMK2BQ13554 666 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 DNASE1L3Q13609 305 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 TP53BP2Q13625 1128 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 SELPLGQ14242 412 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 ZNF267Q14586 743 aaPredicted RBP9.76□□□□□ -0.85
TPM1-221ENST00000559831 DNAL1Q4LDG9 190 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 ZNF628Q5EBL2 1059 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 FAM111BQ6SJ93 734 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 ZNF517Q6ZMY9 492 aaPredicted RBP9.76□□□□□ -0.85
TPM1-221ENST00000559831 ANKRD37Q7Z713 158 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 GALNT12Q8IXK2 581 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 PGAM4Q8N0Y7 254 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 RIT1Q92963 219 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 NXPE2Q96DL1 559 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 HOPXQ9BPY8 73 aaPredicted RBP9.76□□□□□ -0.85
TPM1-221ENST00000559831 PELOQ9BRX2 385 aaKnown RBP9.76□□□□□ -0.85
TPM1-221ENST00000559831 CNPPD1Q9BV87 410 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 LRMDAQ9H2I8 198 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 ANKRA2Q9H9E1 313 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 C3orf14Q9HBI5 128 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 ASCL3Q9NQ33 180 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 THSD1Q9NS62 852 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 SLC25A37Q9NYZ2 338 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 ADA2Q9NZK5 511 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 MAT2BQ9NZL9 334 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 ERVK-11Q9UQG0 969 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 PADI2Q9Y2J8 665 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 L3MBTL1Q9Y468 752 aa9.76□□□□□ -0.85
TPM1-221ENST00000559831 TRBV5-3A0A0A0MS03 114 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 C15orf38-AP3S2A0A0A6YYH1 394 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 IGHV3-20A0A0C4DH32 117 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 LOC101059948A0A1B0GTJ6 334 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 TRABD2BA6NFA1 517 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 EVPLLA8MZ36 301 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 CLIC1O00299 241 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 EMC8O43402 210 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 C1QCP02747 245 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 CD63P08962 238 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 RAB40ALP0C0E4 278 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 ZCCHC18P0CG32 403 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 HOXB9P17482 250 aaPredicted RBP9.75□□□□□ -0.85
TPM1-221ENST00000559831 SLC6A2P23975 617 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 STAT5AP42229 794 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 ID4P47928 161 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 SLC7A2P52569 658 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 CASP9P55211 416 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 EEF1A2Q05639 463 aaKnown RBP9.75□□□□□ -0.85
TPM1-221ENST00000559831 RTP5Q14D33 572 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 EXOSC7Q15024 291 aaKnown RBP9.75□□□□□ -0.85
TPM1-221ENST00000559831 PRICKLE4Q2TBC4 344 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 SFT2D3Q587I9 215 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 RUNDC3AQ59EK9 446 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 RABL3Q5HYI8 236 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 NANOGP8Q6NSW7 305 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 IGF2-ASQ6U949 168 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 BNC2Q6ZN30 1099 aaPredicted RBP9.75□□□□□ -0.85
TPM1-221ENST00000559831 ARPINQ7Z6K5 226 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 IL22RA1Q8N6P7 574 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 NUP43Q8NFH3 380 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 OR7G2Q8NG99 324 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 OR56A1Q8NGH5 318 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 OR2Y1Q8NGV0 311 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 PSMA8Q8TAA3 256 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 SFXN5Q8TD22 340 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 ZNF675Q8TD23 568 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 ZFP90Q8TF47 636 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 MCUR1Q96AQ8 359 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 ELP4Q96EB1 424 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 FAM120BQ96EK7 910 aaKnown RBP9.75□□□□□ -0.85
TPM1-221ENST00000559831 SLC35G5Q96KT7 338 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 ANKRD27Q96NW4 1050 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 CDRT15Q96T59 188 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 CPPED1Q9BRF8 314 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms