RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 VIPAS39Q9H9C1 493 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 ANKRA2Q9H9E1 313 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 MAT2BQ9NZL9 334 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 RAP2CQ9Y3L5 183 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 EXPH5Q8NEV8 1989 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 SYNDIG1LA6NDD5 238 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 NME6O75414 186 aaPredicted RBP17.35■□□□□ 0.37
CASC4-209ENST00000559222 OR2J2O76002 312 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 NEURL1O76050 574 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 LRATO95237 230 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 ZIC2O95409 532 aaPredicted RBP17.35■□□□□ 0.37
CASC4-209ENST00000559222 DDCP20711 480 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 S1PR1P21453 382 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 GRK2P25098 689 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 SLC37A1P57057 533 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 EXOSC7Q15024 291 aaKnown RBP17.35■□□□□ 0.37
CASC4-209ENST00000559222 TLR1Q15399 786 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 OR1C1Q15619 314 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 PRICKLE4Q2TBC4 344 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 ZNF385BQ569K4 471 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 TICAM1Q8IUC6 712 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 GALNT12Q8IXK2 581 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 LGI4Q8N135 537 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 SUN3Q8TAQ9 357 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 FAM76AQ8TAV0 307 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 CPT1CQ8TCG5 803 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 MIB2Q96AX9 1013 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 UTP23Q9BRU9 249 aaKnown RBP17.35■□□□□ 0.37
CASC4-209ENST00000559222 PELOQ9BRX2 385 aaKnown RBP17.35■□□□□ 0.37
CASC4-209ENST00000559222 KLHL1Q9NR64 748 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 ASF1BQ9NVP2 202 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 NKIRAS1Q9NYS0 192 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 HAO1Q9UJM8 370 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 DTX4Q9Y2E6 619 aa17.35■□□□□ 0.37
CASC4-209ENST00000559222 AKAP10O43572 662 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 SNNO75324 88 aaPredicted RBP17.34■□□□□ 0.37
CASC4-209ENST00000559222 OR6B1O95007 311 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 NADKO95544 446 aaPredicted RBP17.34■□□□□ 0.37
CASC4-209ENST00000559222 DRD2P14416 443 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 PCSK2P16519 638 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 CSNK2A2P19784 350 aaPredicted RBP17.34■□□□□ 0.37
CASC4-209ENST00000559222 GALNSP34059 522 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 MRPS35P82673 323 aaKnown RBP17.34■□□□□ 0.37
CASC4-209ENST00000559222 OC90Q02509 493 aaPredicted RBP17.34■□□□□ 0.37
CASC4-209ENST00000559222 MPEG1Q2M385 716 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 CCDC116Q8IYX3 515 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 LRRC25Q8N386 305 aaPredicted RBP17.34■□□□□ 0.37
CASC4-209ENST00000559222 OR9A2Q8NGT5 310 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 TAAR6Q96RI8 345 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 RASL10BQ96S79 203 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 CCT7Q99832 543 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 BRINP2Q9C0B6 783 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 PFDN4Q9NQP4 134 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 MAP10Q9P2G4 905 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 MYOTQ9UBF9 498 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 COPS7AQ9UBW8 275 aa17.34■□□□□ 0.37
CASC4-209ENST00000559222 MAST4O15021 2626 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 TRAV17A0A0B4J275 112 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 PRAMEF2O60811 474 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 WISP2O76076 250 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 CBX7O95931 251 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 ATP1B1P05026 303 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 BCKDHAP12694 445 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 TRHRP34981 398 aaPredicted RBP17.33■□□□□ 0.36
CASC4-209ENST00000559222 SOX3P41225 446 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 RPL14P50914 215 aaKnown RBP17.33■□□□□ 0.36
CASC4-209ENST00000559222 FOXK1P85037 733 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 FUT7Q11130 342 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 BIKQ13323 160 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 HEPACAMQ14CZ8 416 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 EBPQ15125 230 aaKnown RBP17.33■□□□□ 0.36
CASC4-209ENST00000559222 TRMT12Q53H54 448 aaKnown RBP17.33■□□□□ 0.36
CASC4-209ENST00000559222 ZNF766Q5HY98 468 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 C6orf136Q5SQH8 315 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 RNF111Q6ZNA4 994 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 ZNF615Q8N8J6 731 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 KAT2AQ92830 837 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 GAL3ST4Q96RP7 486 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 WWTR1Q9GZV5 400 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 SLC35C2Q9NQQ7 365 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 LRFN1Q9P244 771 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 ABI3Q9P2A4 366 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 MARCOQ9UEW3 520 aaPredicted RBP17.33■□□□□ 0.36
CASC4-209ENST00000559222 ZNF639Q9UID6 485 aa17.33■□□□□ 0.36
CASC4-209ENST00000559222 J3QKU1 62 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 FCHO1O14526 889 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 UQCRFS1P47985 274 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 HLCSP50747 726 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 SSR4P51571 173 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 OCRLQ01968 901 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 CEBPEQ15744 281 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 ZNF628Q5EBL2 1059 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 LYPD8Q6UX82 237 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 TMEM64Q6YI46 380 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 MDGA2Q7Z553 956 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 VWA5B2Q8N398 1253 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 LIX1Q8N485 282 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 OR8K3Q8NH51 312 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 GRHL3Q8TE85 626 aa17.32■□□□□ 0.36
CASC4-209ENST00000559222 CIDECQ96AQ7 238 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms