RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 AGAP7PQ5VUJ5 663 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 SLC6A19Q695T7 634 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 OGFOD2Q6N063 350 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 CGB2Q6NT52 195 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 ISLR2Q6UXK2 745 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 Q6ZS92 163 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 TRIM42Q8IWZ5 723 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 TMEM132CQ8N3T6 1108 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 GOLGA6L1Q8N7Z2 621 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 FNDC5Q8NAU1 212 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 OR7A2PQ8NGA2 310 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 OR9A2Q8NGT5 310 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 RIT1Q92963 219 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 VPS50Q96JG6 964 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 TEX37Q96LM6 180 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 MAGEB18Q96M61 343 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 AGAP4Q96P64 663 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 FAIM2Q9BWQ8 316 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 WDR41Q9HAD4 459 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 SLC35C2Q9NQQ7 365 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 LUZP4Q9P127 313 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 ATP6V1HQ9UI12 483 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 ERVK-11Q9UQG0 969 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 ZNF451Q9Y4E5 1061 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 PCDHGB7Q9Y5F8 929 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 SHANK1Q9Y566 2161 aa10.62□□□□□ -0.71
SNX1-204ENST00000559061 GABRR3A8MPY1 467 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 A8MUI8 341 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 SCAMP2O15127 329 aaKnown RBP10.61□□□□□ -0.71
SNX1-204ENST00000559061 GUCY1B2O75343 617 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 PSMG1O95456 288 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 ICAM2P13598 275 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 CD1EP15812 388 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 CSNK2A2P19784 350 aaPredicted RBP10.61□□□□□ -0.71
SNX1-204ENST00000559061 EFNA1P20827 205 aaPredicted RBP10.61□□□□□ -0.71
SNX1-204ENST00000559061 IL12AP29459 219 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 CLCN2P51788 898 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 WNT3P56703 355 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 RNF4P78317 190 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 PHC1P78364 1004 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 MAP4K2Q12851 820 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 HEPACAMQ14CZ8 416 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 EXOSC7Q15024 291 aaKnown RBP10.61□□□□□ -0.71
SNX1-204ENST00000559061 EBPQ15125 230 aaKnown RBP10.61□□□□□ -0.71
SNX1-204ENST00000559061 PLEKHN1Q494U1 663 aaPredicted RBP10.61□□□□□ -0.71
SNX1-204ENST00000559061 TRMT12Q53H54 448 aaKnown RBP10.61□□□□□ -0.71
SNX1-204ENST00000559061 PRR30Q53SZ7 412 aaPredicted RBP10.61□□□□□ -0.71
SNX1-204ENST00000559061 TMEM198Q66K66 360 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 FAM47EQ6ZV65 393 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 GALNT12Q8IXK2 581 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 CCDC116Q8IYX3 515 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 LGI4Q8N135 537 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 LRRC25Q8N386 305 aaPredicted RBP10.61□□□□□ -0.71
SNX1-204ENST00000559061 MDS2Q8NDY4 140 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 OR7G2Q8NG99 324 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 PIWIL2Q8TC59 973 aaKnown RBP10.61□□□□□ -0.71
SNX1-204ENST00000559061 ZNF675Q8TD23 568 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 LRRC8CQ8TDW0 803 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 THAP3Q8WTV1 239 aaPredicted RBP10.61□□□□□ -0.71
SNX1-204ENST00000559061 DAZLQ92904 295 aaKnown RBP10.61□□□□□ -0.71
SNX1-204ENST00000559061 ADIPOR1Q96A54 375 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 AMDHD1Q96NU7 426 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 SIGLEC12Q96PQ1 595 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 LMF1Q96S06 567 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 EBF4Q9BQW3 602 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 CNPPD1Q9BV87 410 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 MFRPQ9BY79 579 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 HES7Q9BYE0 225 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 RNF32Q9H0A6 362 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 GLIPR2Q9H4G4 154 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 CDCP1Q9H5V8 836 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 REEP4Q9H6H4 257 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 MED4Q9NPJ6 270 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 WBP11Q9Y2W2 641 aaKnown RBP10.61□□□□□ -0.71
SNX1-204ENST00000559061 CLCA3PQ9Y6N3 262 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 USH1CQ9Y6N9 552 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 CNTRLQ7Z7A1 2325 aa10.61□□□□□ -0.71
SNX1-204ENST00000559061 SYNDIG1LA6NDD5 238 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 OR10H2O60403 315 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 EDF1O60869 148 aaKnown RBP10.6□□□□□ -0.71
SNX1-204ENST00000559061 NEURL1O76050 574 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 LAMP1P11279 417 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 TNNI3P19429 210 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 NT5EP21589 574 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 CD96P40200 585 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 EMDP50402 254 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 GUCY1A3Q02108 690 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 TUBA3CQ13748 450 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 SMU1Q2TAY7 513 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 TUBA3EQ6PEY2 450 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 EPGNQ6UW88 154 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 ZNF551Q7Z340 670 aaPredicted RBP10.6□□□□□ -0.71
SNX1-204ENST00000559061 RPS19BP1Q86WX3 136 aaKnown RBP10.6□□□□□ -0.71
SNX1-204ENST00000559061 LRRC34Q8IZ02 419 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 OR8K3Q8NH51 312 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 C16orf52Q8NHV5 167 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 HAS2Q92819 552 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 KAT2AQ92830 837 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 RBM18Q96H35 190 aaKnown RBP10.6□□□□□ -0.71
SNX1-204ENST00000559061 MARK4Q96L34 752 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms