RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 TAS2R16Q9NYV7 291 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 CLEC4EQ9ULY5 219 aa2.62□□□□□ -1.99
VPS13C-207ENST00000558919 CDX4O14627 284 aaPredicted RBP2.61□□□□□ -1.99
VPS13C-207ENST00000558919 NUDT14O95848 222 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 TXNDC12O95881 172 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 FCER2P06734 321 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 TPBGLP0DKB5 382 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 MBL2P11226 248 aaPredicted RBP2.61□□□□□ -1.99
VPS13C-207ENST00000558919 VCLP18206 1134 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 GDF1P27539 372 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 STIP1P31948 543 aaKnown RBP2.61□□□□□ -1.99
VPS13C-207ENST00000558919 SERPINB6P35237 376 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 ARHGDIAP52565 204 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 CXCL6P80162 114 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 MICAQ29983 383 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 MPPE1Q53F39 396 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 FAM219BQ5XKK7 198 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 GCNT7Q6ZNI0 430 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 GPR142Q7Z601 462 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 SYCP3Q8IZU3 236 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 SIDT2Q8NBJ9 832 aaKnown RBP2.61□□□□□ -1.99
VPS13C-207ENST00000558919 OR4L1Q8NH43 312 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 FIBINQ8TAL6 211 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 CRYGNQ8WXF5 182 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 SLC26A1Q9H2B4 701 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 PDFQ9HBH1 243 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 SLC25A19Q9HC21 320 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 PNPLA3Q9NST1 481 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 SPG21Q9NZD8 308 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 RAI14Q9P0K7 980 aa2.61□□□□□ -1.99
VPS13C-207ENST00000558919 MRTO4Q9UKD2 239 aaKnown RBP2.61□□□□□ -1.99
VPS13C-207ENST00000558919 A0A0A6YYD4 124 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 YJEFN3A6XGL0 299 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 H0Y9J4 135 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 TNFSF11O14788 317 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 STBD1O95210 358 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 GJB5O95377 273 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 CENPBP07199 599 aaPredicted RBP2.6□□□□□ -1.99
VPS13C-207ENST00000558919 CHRNGP07510 517 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 PRG2P13727 222 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 B4GALT1P15291 398 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 MAGEA9P43362 315 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 SLC7A2P52569 658 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 STX1BP61266 288 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 ROR1Q01973 937 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 RFTN1Q14699 578 aaPredicted RBP2.6□□□□□ -1.99
VPS13C-207ENST00000558919 KIAA0040Q15053 153 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 TGIF1Q15583 401 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 TRADDQ15628 312 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 HAGHQ16775 308 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 ACER2Q5QJU3 275 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 TAF3Q5VWG9 929 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 C2orf66Q6UXQ4 117 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 RAPH1Q70E73 1250 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 NKAIN3Q8N8D7 197 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 GLYATL1Q969I3 302 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 PIWIL1Q96J94 861 aaKnown RBP2.6□□□□□ -1.99
VPS13C-207ENST00000558919 PRAM1Q96QH2 718 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 DDX50Q9BQ39 737 aaKnown RBP2.6□□□□□ -1.99
VPS13C-207ENST00000558919 GANQ9H2C0 597 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 RNF41Q9H4P4 317 aaPredicted RBP2.6□□□□□ -1.99
VPS13C-207ENST00000558919 TIGARQ9NQ88 270 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 CNIH4Q9P003 139 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 ADAM22Q9P0K1 906 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 IL17CQ9P0M4 197 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 TUBGCP4Q9UGJ1 667 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 FOXA2Q9Y261 457 aaPredicted RBP2.6□□□□□ -1.99
VPS13C-207ENST00000558919 AFF2P51816 1311 aa2.6□□□□□ -1.99
VPS13C-207ENST00000558919 TDRD6O60522 2096 aaKnown RBP2.59□□□□□ -1.99
VPS13C-207ENST00000558919 IGHV3-35A0A0C4DH35 117 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 CACNB4O00305 520 aaPredicted RBP2.59□□□□□ -1.99
VPS13C-207ENST00000558919 PSMD3O43242 534 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 GPAA1O43292 621 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 IGHV3-9P01782 118 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 P0C879 139 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 ZBTB25P24278 435 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 ACP1P24666 158 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 UCP1P25874 307 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 SERPINH1P50454 418 aaKnown RBP2.59□□□□□ -1.99
VPS13C-207ENST00000558919 TKTL1P51854 596 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 CAPRIN1Q14444 709 aaKnown RBP2.59□□□□□ -1.99
VPS13C-207ENST00000558919 LCE3AQ5TA76 89 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 STEAP1BQ6NZ63 245 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 MFSD7Q6UXD7 560 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 APOOLQ6UXV4 268 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 STOX1Q6ZVD7 989 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 UBQLNLQ8IYU4 475 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 LINC00518Q8N0U6 118 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 GDAP1Q8TB36 358 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 FAM46BQ96A09 425 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 SLCO4A1Q96BD0 722 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 BIRC7Q96CA5 298 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 CFAP36Q96G28 342 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 TRIM9Q9C026 710 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 TSPYL1Q9H0U9 437 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 DDX28Q9NUL7 540 aaKnown RBP2.59□□□□□ -1.99
VPS13C-207ENST00000558919 DNAJC11Q9NVH1 559 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 EMCNQ9ULC0 261 aa2.59□□□□□ -1.99
VPS13C-207ENST00000558919 A0A0A6YYC8 382 aaPredicted RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms