RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 HCN4Q9Y3Q4 1203 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 PCDHGA4Q9Y5G9 962 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 COLEC10Q9Y6Z7 277 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 FANCMQ8IYD8 2048 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 TNRC18O15417 2968 aaPredicted RBP10.03□□□□□ -0.8
CUX1-217ENST00000558836 OR10H3O60404 316 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 CELA2BP08218 269 aaPredicted RBP10.03□□□□□ -0.8
CUX1-217ENST00000558836 JUNDP17535 347 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 RHCEP18577 417 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 GGT2P36268 569 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 MC3RP41968 323 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 RNF144AP50876 292 aaPredicted RBP10.03□□□□□ -0.8
CUX1-217ENST00000558836 CRISP3P54108 245 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 ID2Q02363 134 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 TUBA3CQ13748 450 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 ZIC1Q15915 447 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 DEFB134Q4QY38 66 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 PRRT3Q5FWE3 981 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 OR2L5Q8NG80 312 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 PITX2Q99697 317 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 ARPC5LQ9BPX5 153 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 ROGDIQ9GZN7 287 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 NT5DC2Q9H857 520 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 RMI1Q9H9A7 625 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 ZNF226Q9NYT6 803 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 NAALAD2Q9Y3Q0 740 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 WDFY3Q8IZQ1 3526 aa10.03□□□□□ -0.8
CUX1-217ENST00000558836 ZW10O43264 779 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 STSP08842 583 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 ZNF888P0CJ79 500 aaPredicted RBP10.02□□□□□ -0.8
CUX1-217ENST00000558836 ANXA8P13928 327 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 CMPK1P30085 196 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 BUD31P41223 144 aaPredicted RBP10.02□□□□□ -0.8
CUX1-217ENST00000558836 FRKP42685 505 aaPredicted RBP10.02□□□□□ -0.8
CUX1-217ENST00000558836 BMXP51813 675 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 HOXC5Q00444 222 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 TMED1Q13445 227 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 ADPRMQ3LIE5 342 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 KLHL35Q6PF15 583 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 VN1R4Q7Z5H5 301 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 BCDIN3DQ7Z5W3 292 aaKnown RBP10.02□□□□□ -0.8
CUX1-217ENST00000558836 A4GALTQ9NPC4 353 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 SEMA3GQ9NS98 782 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 IMPAD1Q9NX62 359 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 CD207Q9UJ71 328 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 CORINQ9Y5Q5 1042 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 SLCO1B1Q9Y6L6 691 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 AP1M2Q9Y6Q5 423 aa10.02□□□□□ -0.8
CUX1-217ENST00000558836 CTSVO60911 334 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 CHRM4P08173 479 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 CHMP24386 653 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 TEAD1P28347 426 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 NTSP30990 170 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 KCNC4Q03721 635 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 RAB30Q15771 203 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 GPAT3Q53EU6 434 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 ZNF605Q86T29 641 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 APOBEC4Q8WW27 367 aaKnown RBP10.02□□□□□ -0.81
CUX1-217ENST00000558836 GGHQ92820 318 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 FAIM2Q9BWQ8 316 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 MS4A12Q9NXJ0 267 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 ENPP5Q9UJA9 477 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 NDRG2Q9UN36 371 aaKnown RBP10.02□□□□□ -0.81
CUX1-217ENST00000558836 DUSP12Q9UNI6 340 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 POFUT2Q9Y2G5 429 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 LOC105369274A0A096LPK9 316 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 LOC102723532A0A0G2JNH3 316 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 P2RX6O15547 441 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 DPM1O60762 260 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 ADRA2AP08913 450 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 HSMCR30P0CW71 290 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 LIMS1P48059 325 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 SIM1P81133 766 aaPredicted RBP10.02□□□□□ -0.81
CUX1-217ENST00000558836 FUT5Q11128 374 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 GPR18Q14330 331 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 NFATC4Q14934 902 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 SOWAHCQ53LP3 525 aaPredicted RBP10.02□□□□□ -0.81
CUX1-217ENST00000558836 C6orf132Q5T0Z8 1188 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 FBXO42Q6P3S6 717 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 Q6ZS52 159 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 Q6ZSR6 202 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 MTSS1LQ765P7 747 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 BTLAQ7Z6A9 289 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 OR4N4Q8N0Y3 316 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 RHOXF1Q8NHV9 184 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 WDR92Q96MX6 357 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 RAB11FIP5Q9BXF6 653 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 PREBQ9HCU5 417 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 STARD5Q9NSY2 213 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 ACSS1Q9NUB1 689 aaPredicted RBP10.02□□□□□ -0.81
CUX1-217ENST00000558836 C2orf42Q9NWW7 574 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 TMEM9Q9P0T7 183 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 ADAM29Q9UKF5 820 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 HSPE1-MOB4S4R3N1 261 aa10.02□□□□□ -0.81
CUX1-217ENST00000558836 OR6C74A6NCV1 312 aa10.01□□□□□ -0.81
CUX1-217ENST00000558836 H3BN98 237 aa10.01□□□□□ -0.81
CUX1-217ENST00000558836 PEX14O75381 377 aa10.01□□□□□ -0.81
CUX1-217ENST00000558836 DRD2P14416 443 aa10.01□□□□□ -0.81
CUX1-217ENST00000558836 CBLP22681 906 aa10.01□□□□□ -0.81
CUX1-217ENST00000558836 SERPINB1P30740 379 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms