RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 MMGT1Q8N4V1 131 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 GSDMBQ8TAX9 411 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 PYROXD1Q8WU10 500 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 IFT81Q8WYA0 676 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 STARD8Q92502 1023 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 UCN3Q969E3 161 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 ZNF566Q969W8 418 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 PTERQ96BW5 349 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 NXNL1Q96CM4 212 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 LINGO1Q96FE5 620 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 SLC45A3Q96JT2 553 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 GBP5Q96PP8 586 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 PANX3Q96QZ0 392 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 OR2A5Q96R48 311 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 PRR25Q96S07 402 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 RHOXF2Q9BQY4 288 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 TRIM4Q9C037 500 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 ACTL8Q9H568 366 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 ACTR5Q9H9F9 607 aaPredicted RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 GPN2Q9H9Y4 310 aaPredicted RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 INTS10Q9NVR2 710 aaKnown RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 NINJ2Q9NZG7 142 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 OR6C2Q9NZP2 312 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 AKAP7Q9P0M2 348 aaPredicted RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 DNAJB11Q9UBS4 358 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 RNF14Q9UBS8 474 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 LPAR3Q9UBY5 353 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 POLG2Q9UHN1 485 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 HEBP2Q9Y5Z4 205 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 CFAP46Q8IYW2 2715 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 A0A0A6YYC8 382 aaPredicted RBP4□□□□□ -1.77
SPG11-211ENST00000558561 IGHV3-20A0A0C4DH32 117 aa4□□□□□ -1.77
SPG11-211ENST00000558561 A0A0G2JN53 185 aa4□□□□□ -1.77
SPG11-211ENST00000558561 HYKKA2RU49 373 aa4□□□□□ -1.77
SPG11-211ENST00000558561 FAM234BA2RU67 622 aa4□□□□□ -1.77
SPG11-211ENST00000558561 OR2A25A4D2G3 310 aa4□□□□□ -1.77
SPG11-211ENST00000558561 NCF1BA6NI72 391 aaPredicted RBP4□□□□□ -1.77
SPG11-211ENST00000558561 WASHC1A8K0Z3 465 aa4□□□□□ -1.77
SPG11-211ENST00000558561 NCF1CA8MVU1 366 aaPredicted RBP4□□□□□ -1.77
SPG11-211ENST00000558561 E7EQ34 232 aa4□□□□□ -1.77
SPG11-211ENST00000558561 I3L1I5 382 aaPredicted RBP4□□□□□ -1.77
SPG11-211ENST00000558561 AP3B1O00203 1094 aa4□□□□□ -1.77
SPG11-211ENST00000558561 PSMD9O00233 223 aa4□□□□□ -1.77
SPG11-211ENST00000558561 PPP6CO00743 305 aa4□□□□□ -1.77
SPG11-211ENST00000558561 ZW10O43264 779 aa4□□□□□ -1.77
SPG11-211ENST00000558561 VPS26AO75436 327 aa4□□□□□ -1.77
SPG11-211ENST00000558561 CCDC166P0CW27 439 aa4□□□□□ -1.77
SPG11-211ENST00000558561 CDH1P12830 882 aa4□□□□□ -1.77
SPG11-211ENST00000558561 NCF1P14598 390 aaPredicted RBP4□□□□□ -1.77
SPG11-211ENST00000558561 CD1DP15813 335 aa4□□□□□ -1.77
SPG11-211ENST00000558561 EPORP19235 508 aa4□□□□□ -1.77
SPG11-211ENST00000558561 DRD4P21917 467 aa4□□□□□ -1.77
SPG11-211ENST00000558561 PTPN4P29074 926 aa4□□□□□ -1.77
SPG11-211ENST00000558561 OTX2P32243 289 aa4□□□□□ -1.77
SPG11-211ENST00000558561 PPARGP37231 505 aaPredicted RBP4□□□□□ -1.77
SPG11-211ENST00000558561 HNF4AP41235 474 aa4□□□□□ -1.77
SPG11-211ENST00000558561 AGTR2P50052 363 aa4□□□□□ -1.77
SPG11-211ENST00000558561 TPTEP56180 551 aa4□□□□□ -1.77
SPG11-211ENST00000558561 OLR1P78380 273 aa4□□□□□ -1.77
SPG11-211ENST00000558561 PLOD1Q02809 727 aaPredicted RBP4□□□□□ -1.77
SPG11-211ENST00000558561 Q0VFX4 171 aa4□□□□□ -1.77
SPG11-211ENST00000558561 CDC20Q12834 499 aa4□□□□□ -1.77
SPG11-211ENST00000558561 TSNQ15631 228 aaKnown RBP4□□□□□ -1.77
SPG11-211ENST00000558561 PPP1R3AQ16821 1122 aa4□□□□□ -1.77
SPG11-211ENST00000558561 PRTGQ2VWP7 1150 aa4□□□□□ -1.77
SPG11-211ENST00000558561 AARS2Q5JTZ9 985 aaKnown RBP4□□□□□ -1.77
SPG11-211ENST00000558561 TMTC4Q5T4D3 741 aa4□□□□□ -1.77
SPG11-211ENST00000558561 FAAH2Q6GMR7 532 aa4□□□□□ -1.77
SPG11-211ENST00000558561 ANKRD16Q6P6B7 361 aa4□□□□□ -1.77
SPG11-211ENST00000558561 ZNF449Q6P9G9 518 aa4□□□□□ -1.77
SPG11-211ENST00000558561 KLHL35Q6PF15 583 aa4□□□□□ -1.77
SPG11-211ENST00000558561 AMIGO2Q86SJ2 522 aa4□□□□□ -1.77
SPG11-211ENST00000558561 ISCA2Q86U28 154 aa4□□□□□ -1.77
SPG11-211ENST00000558561 SLC26A11Q86WA9 606 aa4□□□□□ -1.77
SPG11-211ENST00000558561 KMT5CQ86Y97 462 aa4□□□□□ -1.77
SPG11-211ENST00000558561 CTAGE3PQ8IX95 158 aa4□□□□□ -1.77
SPG11-211ENST00000558561 SYTL1Q8IYJ3 562 aa4□□□□□ -1.77
SPG11-211ENST00000558561 ESX1Q8N693 406 aa4□□□□□ -1.77
SPG11-211ENST00000558561 FAM98AQ8NCA5 519 aaKnown RBP4□□□□□ -1.77
SPG11-211ENST00000558561 OR5T3Q8NGG3 340 aa4□□□□□ -1.77
SPG11-211ENST00000558561 RP9Q8TA86 221 aaKnown RBP4□□□□□ -1.77
SPG11-211ENST00000558561 HMGCLL1Q8TB92 370 aa4□□□□□ -1.77
SPG11-211ENST00000558561 DOK4Q8TEW6 326 aa4□□□□□ -1.77
SPG11-211ENST00000558561 KCNJ9Q92806 393 aa4□□□□□ -1.77
SPG11-211ENST00000558561 ZUFSPQ96AP4 578 aa4□□□□□ -1.77
SPG11-211ENST00000558561 C8orf44Q96CB5 159 aa4□□□□□ -1.77
SPG11-211ENST00000558561 TM4SF19Q96DZ7 209 aa4□□□□□ -1.77
SPG11-211ENST00000558561 VPS39Q96JC1 886 aa4□□□□□ -1.77
SPG11-211ENST00000558561 C10orf90Q96M02 699 aa4□□□□□ -1.77
SPG11-211ENST00000558561 TSNARE1Q96NA8 513 aa4□□□□□ -1.77
SPG11-211ENST00000558561 ZNF285Q96NJ3 590 aa4□□□□□ -1.77
SPG11-211ENST00000558561 GPR78Q96P69 363 aa4□□□□□ -1.77
SPG11-211ENST00000558561 CD180Q99467 661 aa4□□□□□ -1.77
SPG11-211ENST00000558561 TIMP4Q99727 224 aa4□□□□□ -1.77
SPG11-211ENST00000558561 B3GNT4Q9C0J1 378 aa4□□□□□ -1.77
SPG11-211ENST00000558561 PCDHAC1Q9H158 963 aa4□□□□□ -1.77
SPG11-211ENST00000558561 SLC25A32Q9H2D1 315 aa4□□□□□ -1.77
SPG11-211ENST00000558561 CDC42EP4Q9H3Q1 356 aaKnown RBP4□□□□□ -1.77
SPG11-211ENST00000558561 VPS37BQ9H9H4 285 aa4□□□□□ -1.77
SPG11-211ENST00000558561 PARVBQ9HBI1 364 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms