RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 SLAMF7Q9NQ25 335 aa16.26■□□□□ 0.19
TPM1-214ENST00000558544 ATP6V1HQ9UI12 483 aa16.26■□□□□ 0.19
TPM1-214ENST00000558544 ZNF223Q9UK11 482 aaPredicted RBP16.26■□□□□ 0.19
TPM1-214ENST00000558544 PPIEQ9UNP9 301 aaKnown RBP16.26■□□□□ 0.19
TPM1-214ENST00000558544 ERVK-19Q9WJR5 959 aa16.26■□□□□ 0.19
TPM1-214ENST00000558544 ERVH48-1M5A8F1 160 aa16.25■□□□□ 0.19
TPM1-214ENST00000558544 ANKRD28O15084 1053 aa16.25■□□□□ 0.19
TPM1-214ENST00000558544 UBDO15205 165 aa16.25■□□□□ 0.19
TPM1-214ENST00000558544 CLCN2P51788 898 aa16.25■□□□□ 0.19
TPM1-214ENST00000558544 NCBP2P52298 156 aaKnown RBP eCLIP16.25■□□□□ 0.19
TPM1-214ENST00000558544 KCNAB2Q13303 367 aa16.25■□□□□ 0.19
TPM1-214ENST00000558544 PRICKLE4Q2TBC4 344 aa16.25■□□□□ 0.19
TPM1-214ENST00000558544 FAM9CQ8IZT9 166 aa16.25■□□□□ 0.19
TPM1-214ENST00000558544 PSMF1Q92530 271 aa16.25■□□□□ 0.19
TPM1-214ENST00000558544 SENP5Q96HI0 755 aaPredicted RBP16.25■□□□□ 0.19
TPM1-214ENST00000558544 FBXL20Q96IG2 436 aa16.25■□□□□ 0.19
TPM1-214ENST00000558544 ART5Q96L15 291 aa16.25■□□□□ 0.19
TPM1-214ENST00000558544 GLIPR2Q9H4G4 154 aa16.25■□□□□ 0.19
TPM1-214ENST00000558544 MAT2BQ9NZL9 334 aa16.25■□□□□ 0.19
TPM1-214ENST00000558544 PTGFRNQ9P2B2 879 aa16.25■□□□□ 0.19
TPM1-214ENST00000558544 COPS7AQ9UBW8 275 aa16.25■□□□□ 0.19
TPM1-214ENST00000558544 GPR45Q9Y5Y3 372 aa16.25■□□□□ 0.19
TPM1-214ENST00000558544 NUP214P35658 2090 aaPredicted RBP16.24■□□□□ 0.19
TPM1-214ENST00000558544 A8MUI8 341 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 MKRN2OSH3BPM6 223 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 LAMP1P11279 417 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 IDO1P14902 403 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 EFNA1P20827 205 aaPredicted RBP16.24■□□□□ 0.19
TPM1-214ENST00000558544 SSTR4P31391 388 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 MPIP34949 423 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 C21orf58P58505 322 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 UFM1P61960 85 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 MRPS35P82673 323 aaKnown RBP16.24■□□□□ 0.19
TPM1-214ENST00000558544 RPS6KA2Q15349 733 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 ZNF628Q5EBL2 1059 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 CPTPQ5TA50 214 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 B3GNTL1Q67FW5 361 aaPredicted RBP16.24■□□□□ 0.19
TPM1-214ENST00000558544 FCRLBQ6BAA4 426 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 JMJD6Q6NYC1 403 aaPredicted RBP16.24■□□□□ 0.19
TPM1-214ENST00000558544 FAM111BQ6SJ93 734 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 ABHD17AQ96GS6 310 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 TEX37Q96LM6 180 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 TMEM120AQ9BXJ8 343 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 SEMA4CQ9C0C4 833 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 ZNF552Q9H707 407 aaPredicted RBP16.24■□□□□ 0.19
TPM1-214ENST00000558544 MAPRE3Q9UPY8 281 aa16.24■□□□□ 0.19
TPM1-214ENST00000558544 C9JVG2 144 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 PRKNO60260 465 aaPredicted RBP16.23■□□□□ 0.19
TPM1-214ENST00000558544 IGKV3-11P04433 115 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 DDX5P17844 614 aaKnown RBP16.23■□□□□ 0.19
TPM1-214ENST00000558544 LSP1P33241 339 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 SOX18P35713 384 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 GNGT1P63211 74 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 MGAT2Q10469 447 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 HSPB3Q12988 150 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 GSTA3Q16772 222 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 PGS1Q32NB8 556 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 PDCD4Q53EL6 469 aaKnown RBP16.23■□□□□ 0.19
TPM1-214ENST00000558544 AGAP7PQ5VUJ5 663 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 PCSK4Q6UW60 755 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 VWA5B2Q8N398 1253 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 ZNF675Q8TD23 568 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 THAP3Q8WTV1 239 aaPredicted RBP16.23■□□□□ 0.19
TPM1-214ENST00000558544 STON2Q8WXE9 905 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 KAT2AQ92830 837 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 CHMP6Q96FZ7 201 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 RILPQ96NA2 401 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 AMDHD1Q96NU7 426 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 AGAP4Q96P64 663 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 PRPF18Q99633 342 aaKnown RBP16.23■□□□□ 0.19
TPM1-214ENST00000558544 DEFB126Q9BYW3 111 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 ATAD3AQ9NVI7 634 aa16.23■□□□□ 0.19
TPM1-214ENST00000558544 PCDHGA9Q9Y5G4 932 aaKnown RBP16.23■□□□□ 0.19
TPM1-214ENST00000558544 IGSF10Q6WRI0 2623 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 SHOX2O60902 331 aaPredicted RBP16.22■□□□□ 0.19
TPM1-214ENST00000558544 CLPSP04118 112 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 PCSK2P16519 638 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 SOX11P35716 441 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 FRKP42685 505 aaPredicted RBP16.22■□□□□ 0.19
TPM1-214ENST00000558544 SEC24CP53992 1094 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 CLNS1AP54105 237 aaKnown RBP16.22■□□□□ 0.19
TPM1-214ENST00000558544 FUT7Q11130 342 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 MAP4K2Q12851 820 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 EXOSC7Q15024 291 aaKnown RBP16.22■□□□□ 0.19
TPM1-214ENST00000558544 TRMT12Q53H54 448 aaKnown RBP16.22■□□□□ 0.19
TPM1-214ENST00000558544 CRB2Q5IJ48 1285 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 HSDL2Q6YN16 418 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 RNF111Q6ZNA4 994 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 ZNF551Q7Z340 670 aaPredicted RBP16.22■□□□□ 0.19
TPM1-214ENST00000558544 EXD3Q8N9H8 876 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 SIMC1Q8NDZ2 872 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 CTHRC1Q96CG8 243 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 COQ8BQ96D53 544 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 ZBED6CLQ96FA7 236 aaPredicted RBP16.22■□□□□ 0.19
TPM1-214ENST00000558544 NPAS2Q99743 824 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 DUSP26Q9BV47 211 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 BHLHE41Q9C0J9 482 aaPredicted RBP16.22■□□□□ 0.19
TPM1-214ENST00000558544 ADNPQ9H2P0 1102 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 CLMPQ9H6B4 373 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 ANKRA2Q9H9E1 313 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms