RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 SLC35E2P0CK97 266 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 SERPINB5P36952 375 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 PTDSS1P48651 473 aaKnown RBP8.08□□□□□ -1.12
USP3-208ENST00000558285 NRG3P56975 720 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 MLF1P58340 268 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 TUBA3CQ13748 450 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 UBAP2LQ14157 1087 aaKnown RBP8.08□□□□□ -1.12
USP3-208ENST00000558285 HEPACAMQ14CZ8 416 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 IGFBP7Q16270 282 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 TNFAIP8L3Q5GJ75 292 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 LIPMQ5VYY2 423 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 SLC25A25Q6KCM7 469 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 TUBA3EQ6PEY2 450 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 RGS9BPQ6ZS82 235 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 ZNF554Q86TJ5 538 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 RETREG3Q86VR2 466 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 SLC15A4Q8N697 577 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 CDYL2Q8N8U2 506 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 Q8NA96 180 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 OR4K14Q8NGD5 310 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 OR52B6Q8NGF0 335 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 PPP1R14CQ8TAE6 165 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 GRHL3Q8TE85 626 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 RIT1Q92963 219 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 NCLNQ969V3 563 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 APOPT1Q96IL0 206 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 MAPKAP1Q9BPZ7 522 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 NECTIN3Q9NQS3 549 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 ASF1BQ9NVP2 202 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 HPF1Q9NWY4 346 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 MKS1Q9NXB0 559 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 PLA2G3Q9NZ20 509 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 KCMF1Q9P0J7 381 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 KLHL14Q9P2G3 628 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 ASB1Q9Y576 335 aa8.08□□□□□ -1.12
USP3-208ENST00000558285 CELSR3Q9NYQ7 3312 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 A0A0A6YYD5 115 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 A0A1B0GVG6 124 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 RTCAO00442 366 aaKnown RBP8.07□□□□□ -1.12
USP3-208ENST00000558285 MANBAO00462 879 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 RGS16O15492 202 aaPredicted RBP8.07□□□□□ -1.12
USP3-208ENST00000558285 PROM1O43490 865 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 DLX3O60479 287 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 PRAMEF4O60810 478 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 TRIM13O60858 407 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 SH3BGRLO75368 114 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 BCAS2O75934 225 aaPredicted RBP8.07□□□□□ -1.12
USP3-208ENST00000558285 B3GALT4O96024 378 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 KLK1P06870 262 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 DRD2P14416 443 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 CSNK2A2P19784 350 aaPredicted RBP8.07□□□□□ -1.12
USP3-208ENST00000558285 NEK2P51955 445 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 CDH13P55290 713 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 SESN3P58005 492 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 ALDH6A1Q02252 535 aaKnown RBP8.07□□□□□ -1.12
USP3-208ENST00000558285 CBX3Q13185 183 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 MAPKAPK3Q16644 382 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 CNPY1Q3B7I2 92 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 RNF220Q5VTB9 566 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 PRAMEF9Q5VWM5 478 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 DMRTA1Q5VZB9 504 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 DESI1Q6ICB0 168 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 GFRALQ6UXV0 394 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 BNC2Q6ZN30 1099 aaPredicted RBP8.07□□□□□ -1.12
USP3-208ENST00000558285 RNF111Q6ZNA4 994 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 CYP4Z2PQ8N1L4 340 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 ARMC10Q8N2F6 343 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 METTL4Q8N3J2 472 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 NUBPLQ8TB37 319 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 NR4A3Q92570 626 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 SLC35B4Q969S0 331 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 MTFMTQ96DP5 389 aaKnown RBP8.07□□□□□ -1.12
USP3-208ENST00000558285 FBXL20Q96IG2 436 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 MAGED4Q96JG8 741 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 CDK15Q96Q40 435 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 CCT7Q99832 543 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 MID1IP1Q9NPA3 183 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 SEC14L3Q9UDX4 400 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 ENTPD4Q9Y227 616 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 SLC5A6Q9Y289 635 aa8.07□□□□□ -1.12
USP3-208ENST00000558285 TCP11X1B4DZS4 312 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 MASP2O00187 686 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 SLC28A1O00337 649 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 TP53I11O14683 189 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 RGS14O43566 566 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 PLIN3O60664 434 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 LDB3O75112 727 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 ITGA10O75578 1167 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 DCTN3O75935 186 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 SLITRK5O94991 958 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 OR4F21O95013 312 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 P04436 131 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 SP1P08047 785 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 PABPC4LP0CB38 370 aaKnown RBP8.06□□□□□ -1.12
USP3-208ENST00000558285 GNLYP22749 145 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 GCAP28676 217 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 SERPINB3P29508 390 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 BSGP35613 385 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 GMPRP36959 345 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 CD96P40200 585 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms