RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 ZFP37Q9Y6Q3 630 aaPredicted RBP2.51□□□□□ -2.01
SPG11-206ENST00000558093 POGZQ7Z3K3 1410 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 ACEP12821 1306 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 UMODL1Q5DID0 1318 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 A0A087X0K7 114 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 A0A1W2PQ72 361 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 FAM168BA1KXE4 195 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 FAM149AA5PLN7 773 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 ZSCAN5CA6NGD5 496 aaPredicted RBP2.5□□□□□ -2.01
SPG11-206ENST00000558093 RNF212BA8MTL3 300 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 H0Y626 953 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 H0YC42 278 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 NDC80O14777 642 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 CASQ2O14958 399 aaPredicted RBP2.5□□□□□ -2.01
SPG11-206ENST00000558093 GLCEO94923 617 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 GH1P01241 217 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 GPX3P22352 226 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 ATP5DP30049 168 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 HSPA1LP34931 641 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 HMGCLP35914 325 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 FRKP42685 505 aaPredicted RBP2.5□□□□□ -2.01
SPG11-206ENST00000558093 RPL27P61353 136 aaKnown RBP2.5□□□□□ -2.01
SPG11-206ENST00000558093 SLC34A1Q06495 639 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 ARHGAP1Q07960 439 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 BFSP1Q12934 665 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 EMC2Q15006 297 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 SPHARQ15513 63 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 ZNF674Q2M3X9 581 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 PRR30Q53SZ7 412 aaPredicted RBP2.5□□□□□ -2.01
SPG11-206ENST00000558093 NHSL2Q5HYW2 709 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 DCAF12Q5T6F0 453 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 DDI2Q5TDH0 399 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 CYP4V2Q6ZWL3 525 aaPredicted RBP2.5□□□□□ -2.01
SPG11-206ENST00000558093 PPP1R42Q7Z4L9 355 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 KLHDC8AQ8IYD2 350 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 SLC34A3Q8N130 599 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 THEM5Q8N1Q8 247 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 OR1K1Q8NGR3 316 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 TBCKQ8TEA7 893 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 C17orf50Q8WW18 174 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 CTNNBL1Q8WYA6 563 aaPredicted RBP2.5□□□□□ -2.01
SPG11-206ENST00000558093 BADQ92934 168 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 AP2M1Q96CW1 435 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 PCED1BQ96HM7 432 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 B3GALT6Q96L58 329 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 RAB40CQ96S21 281 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 LZTS2Q9BRK4 669 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 SLC39A3Q9BRY0 314 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 TCHPQ9BT92 498 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 UTP14AQ9BVJ6 771 aaKnown RBP2.5□□□□□ -2.01
SPG11-206ENST00000558093 ACAT2Q9BWD1 397 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 SLC7A5P2Q9GIP4 190 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 ZBP1Q9H171 429 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 LIN28AQ9H9Z2 209 aaKnown RBP2.5□□□□□ -2.01
SPG11-206ENST00000558093 ABCC13Q9NSE7 274 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 FAM212BQ9NTI7 297 aaPredicted RBP2.5□□□□□ -2.01
SPG11-206ENST00000558093 HPCAL4Q9UM19 191 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 ERVK-19Q9WJR5 959 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 KIF25-AS1Q9Y6Z4 181 aa2.5□□□□□ -2.01
SPG11-206ENST00000558093 ARPC4-TTLL3A0A0A6YYG9 625 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 SDR42E2A6NKP2 422 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 SRRM4A7MD48 611 aaKnown RBP2.49□□□□□ -2.01
SPG11-206ENST00000558093 E2F6O75461 281 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 CSDE1O75534 798 aaKnown RBP2.49□□□□□ -2.01
SPG11-206ENST00000558093 GAS8O95995 478 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 TPM3P06753 285 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 FOSL2P15408 326 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 FERP16591 822 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 GAP43P17677 238 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 MAGEB1P43366 347 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 FNTAP49354 379 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 KCNK10P57789 538 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 IGLV3-21P80748 117 aaPredicted RBP2.49□□□□□ -2.01
SPG11-206ENST00000558093 NDPQ00604 133 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 C17orf67Q0P5P2 114 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 RFTN1Q14699 578 aaPredicted RBP2.49□□□□□ -2.01
SPG11-206ENST00000558093 LTB4RQ15722 352 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 C14orf28Q4W4Y0 310 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 UTF1Q5T230 341 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 CCDC183Q5T5S1 534 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 C1orf189Q5VU69 101 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 Q6ZRG5 221 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 LPCAT2Q7L5N7 544 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 C17orf64Q86WR6 236 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 PRR22Q8IZ63 422 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 ARL14Q8N4G2 192 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 GVQW1Q8N7I0 195 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 DRAXINQ8NBI3 349 aaPredicted RBP2.49□□□□□ -2.01
SPG11-206ENST00000558093 SPC24Q8NBT2 197 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 OR7G3Q8NG95 312 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 FLVCR1-AS1Q8TAF5 88 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 PRCCQ92733 491 aaPredicted RBP2.49□□□□□ -2.01
SPG11-206ENST00000558093 GGHQ92820 318 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 C16orf45Q96MC5 204 aaPredicted RBP2.49□□□□□ -2.01
SPG11-206ENST00000558093 WWP1Q9H0M0 922 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 NAPBQ9H115 298 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 VPS37BQ9H9H4 285 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 AMBNQ9NP70 447 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 TAS2R16Q9NYV7 291 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 AIPL1Q9NZN9 384 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms