RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 IL21Q9HBE4 155 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 MRPL17Q9NRX2 175 aaKnown RBP11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 TOR4AQ9NXH8 423 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 COMMD3Q9UBI1 195 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 SEC14L3Q9UDX4 400 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 ACAD8Q9UKU7 415 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 CARD8Q9Y2G2 431 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 PCDHGB7Q9Y5F8 929 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 TET1Q8NFU7 2136 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 THSD7BQ9C0I4 1608 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 FAM240BA0A1B0GVZ2 78 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 TMEM129A0AVI4 362 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 SNTNA6NMZ2 147 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 RECQLP46063 649 aaPredicted RBP11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 GIPRP48546 466 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 RAB40BQ12829 278 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 KIAA1211LQ6NV74 962 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 CNIH2Q6PI25 160 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 TMEM220Q6QAJ8 160 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 CD300LDQ6UXZ3 194 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 CRIPAKQ8N1N5 446 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 SYT14Q8NB59 555 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 OR4D11Q8NGI4 311 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 TMEM163Q8TC26 289 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 DEDD2Q8WXF8 326 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 RAB8BQ92930 207 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 GLYATL1Q969I3 302 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 PPP1R16AQ96I34 528 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 FUZQ9BT04 418 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 TRAF4Q9BUZ4 470 aaPredicted RBP11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 NFKBIL1Q9UBC1 381 aaPredicted RBP11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 SF3B6Q9Y3B4 125 aaKnown RBP11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 INSL5Q9Y5Q6 135 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 CASKO14936 926 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 MMP20O60882 483 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 CTSAP10619 480 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 ACP2P11117 423 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 PTBP1P26599 531 aaKnown RBP eCLIP11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 FGF9P31371 208 aaPredicted RBP11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 GABRA5P31644 462 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 MANFP55145 182 aaKnown RBP11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 TMEM115Q12893 351 aaPredicted RBP11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 GPNMBQ14956 572 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 SNAPC1Q16533 368 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 DUSP6Q16828 381 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 SPDYE7PQ495Y7 208 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 OR2G6Q5TZ20 316 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 FAM180BQ6P0A1 224 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 PODNL1Q6PEZ8 512 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 LINC00471Q8N535 108 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 NATD1Q8N6N6 113 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 TTC9Q92623 222 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 MRPS31Q92665 395 aaKnown RBP11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 SNAPC3Q92966 411 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 TM9SF2Q99805 663 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 RSPO3Q9BXY4 272 aaPredicted RBP11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 SPNS1Q9H2V7 528 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 PPP1R3EQ9H7J1 279 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 MVB12BQ9H7P6 319 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 SYNDIG1Q9H7V2 258 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 TRIM45Q9H8W5 580 aaPredicted RBP11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 FGF20Q9NP95 211 aaPredicted RBP11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 AHSPQ9NZD4 102 aa11.2□□□□□ -0.62
VIPAS39-211ENST00000557658 CASP8AP2Q9UKL3 1982 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 MYOFQ9NZM1 2061 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 A0A0G2JMP0 313 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 A0A1W2PRQ8 180 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 ANHXE9PGG2 379 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 AGRPO00253 132 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 LYRM1O43325 122 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 CRYZL1O95825 349 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 DDCP20711 480 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 GABRR2P28476 465 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 SMSP52788 366 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 CCL23P55773 120 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 PIN1Q13526 163 aaPredicted RBP11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 WSCD2Q2TBF2 565 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 TYW3Q6IPR3 259 aaKnown RBP11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 ACSM5Q6NUN0 579 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 ZNF767PQ75MW2 155 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 C6orf120Q7Z4R8 191 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 PLA2G15Q8NCC3 412 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 OR9A1PQ8NGU1 263 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 GATAD2BQ8WXI9 593 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 TM9SF4Q92544 642 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 RNFT2Q96EX2 444 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 ZBED6CLQ96FA7 236 aaPredicted RBP11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 SOSTQ9BQB4 213 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 FNDC11Q9BVV2 318 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 GTPBP2Q9BX10 602 aaKnown RBP11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 SORBS1Q9BX66 1292 aaKnown RBP11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 NEUROD4Q9HD90 331 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 STARD7Q9NQZ5 370 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 DIABLOQ9NR28 239 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 MRPS18AQ9NVS2 196 aaKnown RBP11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 A4GNTQ9UNA3 340 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 EXOSC1Q9Y3B2 195 aaKnown RBP11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 CLCA3PQ9Y6N3 262 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 PLXND1Q9Y4D7 1925 aa11.19□□□□□ -0.62
VIPAS39-211ENST00000557658 TMEM88BA6NKF7 163 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms