RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 C15orf38-AP3S2A0A0A6YYH1 394 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 hCG_38984A0A1B0GV85 526 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 NKX6-3A6NJ46 265 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 A8MU76 341 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 TCP10L2B9ZVM9 353 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 H3BMH7 237 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 SGK1O00141 431 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 ZNF195O14628 629 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 NUDT21O43809 227 aaKnown RBP2.74□□□□□ -1.97
TRAV28-201ENST00000557548 NEMFO60524 1076 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 TM7SF2O76062 418 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 UFL1O94874 794 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 NDUFA7O95182 113 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 FGF19O95750 216 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 CAVIN2O95810 425 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 ANGPTL1O95841 491 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 GOT2P00505 430 aaKnown RBP2.74□□□□□ -1.97
TRAV28-201ENST00000557548 CSF2P04141 144 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 ALPLP05186 524 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 FAM157CP0CG43 387 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 MBL2P11226 248 aaPredicted RBP2.74□□□□□ -1.97
TRAV28-201ENST00000557548 C4BPBP20851 252 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 GIFP27352 417 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 HTR2AP28223 471 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 AXLP30530 894 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 GDI1P31150 447 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 TRIM23P36406 574 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 MATKP42679 507 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 MTIF2P46199 727 aaKnown RBP2.74□□□□□ -1.97
TRAV28-201ENST00000557548 RGS4P49798 205 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 MRPS21P82921 87 aaKnown RBP2.74□□□□□ -1.97
TRAV28-201ENST00000557548 NAAAQ02083 359 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 LRIT3Q3SXY7 679 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 POM121L1PQ3SYA9 428 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 ZNF311Q5JNZ3 666 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 SPATA46Q5T0L3 261 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 AWAT2Q6E213 333 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 STEAP1BQ6NZ63 245 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 BLOC1S2Q6QNY1 142 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 DPY19L2P2Q6ZN68 376 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 PAQR9Q6ZVX9 377 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 GPBP1Q86WP2 473 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 FAM131BQ86XD5 332 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 CBWD2Q8IUF1 395 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 LACC1Q8IV20 430 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 CDH26Q8IXH8 852 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 LINC00518Q8N0U6 118 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 ARFGAP2Q8N6H7 521 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 CNBD1Q8NA66 436 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 TMEM178AQ8NBL3 297 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 KLHDC9Q8NEP7 349 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 RPLP0P6Q8NHW5 317 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 GOLGA5Q8TBA6 731 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 PNPT1Q8TCS8 783 aaKnown RBP2.74□□□□□ -1.97
TRAV28-201ENST00000557548 SMAP2Q8WU79 429 aaPredicted RBP2.74□□□□□ -1.97
TRAV28-201ENST00000557548 GATAD1Q8WUU5 269 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 NUDCD2Q8WVJ2 157 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 ANKRD49Q8WVL7 239 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 TCP11Q8WWU5 503 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 ITFG2Q969R8 447 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 HPDLQ96IR7 371 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 FAM218AQ96MZ4 157 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 VSTM2LQ96N03 204 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 UHRF2Q96PU4 802 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 PSKH2Q96QS6 385 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 TESK2Q96S53 571 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 SECISBP2Q96T21 854 aaKnown RBP2.74□□□□□ -1.97
TRAV28-201ENST00000557548 ZPBPQ9BS86 351 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 PAPOLGQ9BWT3 736 aaKnown RBP2.74□□□□□ -1.97
TRAV28-201ENST00000557548 RBM24Q9BX46 236 aaKnown RBP2.74□□□□□ -1.97
TRAV28-201ENST00000557548 GSDMCQ9BYG8 508 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 KAT8Q9H7Z6 458 aaKnown RBP2.74□□□□□ -1.97
TRAV28-201ENST00000557548 LRRC40Q9H9A6 602 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 ZFP57Q9NU63 452 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 AGPAT5Q9NUQ2 364 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 RNF7Q9UBF6 113 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 TRAF3IP3Q9Y228 551 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 NAALAD2Q9Y3Q0 740 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 MAB21L2Q9Y586 359 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 PCDHGB1Q9Y5G3 927 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 SMCHD1A6NHR9 2005 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 PARD3Q8TEW0 1356 aa2.74□□□□□ -1.97
TRAV28-201ENST00000557548 KIAA1210Q9ULL0 1709 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 RNF123Q5XPI4 1314 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 STK36Q9NRP7 1315 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 CUX2O14529 1486 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 SCRIBQ14160 1630 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 A0A1W2PR80 420 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 GSAPA4D1B5 854 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ZSCAN5BA6NJL1 495 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 MEI4A8MW99 385 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 NPIPA2E9PIF3 369 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 E9PMD0 336 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 SGK494L7N484 410 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 DCXO43602 365 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 BUB1O43683 1085 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 E2F6O75461 281 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 STK17BO94768 372 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 NADKO95544 446 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms