RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 LRRC49Q8IUZ0 686 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 PRSS35Q8N3Z0 413 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 CCDC185Q8N715 623 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 ZNF713Q8N859 430 aaPredicted RBP2.98□□□□□ -1.93
VRK1-207ENST00000557352 SDR42E1Q8WUS8 393 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 CNDP2Q96KP4 475 aaKnown RBP2.98□□□□□ -1.93
VRK1-207ENST00000557352 TXLNGYQ9BZA5 131 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 ZSCAN16Q9H4T2 348 aaPredicted RBP2.98□□□□□ -1.93
VRK1-207ENST00000557352 FNDC4Q9H6D8 234 aaPredicted RBP2.98□□□□□ -1.93
VRK1-207ENST00000557352 EXOC1Q9NV70 894 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 RBM28Q9NW13 759 aaKnown RBP2.98□□□□□ -1.93
VRK1-207ENST00000557352 SLC12A6Q9UHW9 1150 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 GTF3C4Q9UKN8 822 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 ISY1Q9ULR0 285 aaKnown RBP2.98□□□□□ -1.93
VRK1-207ENST00000557352 SMC3Q9UQE7 1217 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 MGAMO43451 1857 aa2.98□□□□□ -1.93
VRK1-207ENST00000557352 LRRC37A2A6NM11 1700 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 KLF18A0A0U1RQI7 1052 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 CCDC69A6NI79 296 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 A8MU76 341 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 IFIT3O14879 490 aaKnown RBP2.97□□□□□ -1.93
VRK1-207ENST00000557352 KIF5CO60282 957 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 CTDNEP1O95476 244 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 MBD3O95983 291 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 DNTTP04053 509 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 ADRB2P07550 413 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 ATP6V1B1P15313 513 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 EPORP19235 508 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 U2AF2P26368 475 aaKnown RBP eCLIP2.97□□□□□ -1.93
VRK1-207ENST00000557352 GJB2P29033 226 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 CHRNA3P32297 505 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 KIF5BP33176 963 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 RPL34P49207 117 aaKnown RBP2.97□□□□□ -1.93
VRK1-207ENST00000557352 RAB28P51157 221 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 DYNLL1P63167 89 aaKnown RBP2.97□□□□□ -1.93
VRK1-207ENST00000557352 EIF4EBP2Q13542 120 aaPredicted RBP2.97□□□□□ -1.93
VRK1-207ENST00000557352 KLHL40Q2TBA0 621 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 POM121L1PQ3SYA9 428 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 TCP11X2Q5H9J9 407 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 ERMARDQ5T6L9 678 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 CDC42EP5Q6NZY7 148 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 TATDN1Q6P1N9 297 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 FUT10Q6P4F1 479 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 OLFM4Q6UX06 510 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 MACC1Q6ZN28 852 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 RBPMS2Q6ZRY4 209 aaKnown RBP2.97□□□□□ -1.93
VRK1-207ENST00000557352 Q6ZVQ6 151 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 PLPPR4Q7Z2D5 763 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 PRUNE1Q86TP1 453 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 CCDC83Q8IWF9 413 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 TEX26Q8N6G2 289 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 P2RX5Q93086 422 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 HDAC11Q96DB2 347 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 LZTS2Q9BRK4 669 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 SPZ1Q9BXG8 430 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 SNX25Q9H3E2 840 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 DBNDD1Q9H9R9 158 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 C3orf14Q9HBI5 128 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 SH3GLB2Q9NR46 395 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 DEPPQ9NTK1 212 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 SPATA2Q9UM82 520 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 CASP8AP2Q9UKL3 1982 aa2.97□□□□□ -1.93
VRK1-207ENST00000557352 DOCK5Q9H7D0 1870 aa2.96□□□□□ -1.93
VRK1-207ENST00000557352 PLXNB2O15031 1838 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 ESYT2A0FGR8 921 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 TSPY2A6NKD2 308 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 H0Y9J4 135 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 CDX4O14627 284 aaPredicted RBP2.96□□□□□ -1.94
VRK1-207ENST00000557352 CPLX1O14810 134 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 OR6B1O95007 311 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 DEXIO95424 95 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 YEATS4O95619 227 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 GGPS1O95749 300 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 IGHG1P01857 330 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 MT-ND2P03891 347 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 GIG44P09565 113 aaPredicted RBP2.96□□□□□ -1.94
VRK1-207ENST00000557352 TSPY3P0CV98 308 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 TSPY8P0CW00 308 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 TOP1P11387 765 aaKnown RBP2.96□□□□□ -1.94
VRK1-207ENST00000557352 SULT2A1Q06520 285 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 ORC2Q13416 577 aaPredicted RBP2.96□□□□□ -1.94
VRK1-207ENST00000557352 CST9LP1Q5W188 147 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 GALNT17Q6IS24 598 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 TMEM179Q6ZVK1 233 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 CHST3Q7LGC8 479 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 TRMT11Q7Z4G4 463 aaKnown RBP2.96□□□□□ -1.94
VRK1-207ENST00000557352 MFN1Q8IWA4 741 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 ZNF444Q8N0Y2 327 aaPredicted RBP2.96□□□□□ -1.94
VRK1-207ENST00000557352 NECAB1Q8N987 351 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 FAM184AQ8NB25 1140 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 XXYLT1Q8NBI6 393 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 GMCL1P1Q8NEA9 526 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 FAM151AQ8WW52 585 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 RMDN1Q96DB5 314 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 ERP27Q96DN0 273 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 PGAP3Q96FM1 320 aaPredicted RBP2.96□□□□□ -1.94
VRK1-207ENST00000557352 TCEANC2Q96MN5 208 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 CFAP57Q96MR6 1250 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 CENPOQ9BU64 300 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 KCNK13Q9HB14 408 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms