RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 C5orf34Q96MH7 638 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 VIPAS39Q9H9C1 493 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 LIN28AQ9H9Z2 209 aaKnown RBP9.92□□□□□ -0.82
LINC00239-201ENST00000556973 MYNNQ9NPC7 610 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 TMED5Q9Y3A6 229 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 RAP2CQ9Y3L5 183 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 POLR3HQ9Y535 204 aaPredicted RBP9.92□□□□□ -0.82
LINC00239-201ENST00000556973 PTGDR2Q9Y5Y4 395 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 TMEM233B4DJY2 109 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 WWP2O00308 870 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 PIP5K1BO14986 540 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 LSM1O15116 133 aaKnown RBP9.91□□□□□ -0.82
LINC00239-201ENST00000556973 ITM2AO43736 263 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 CT62P0C5K7 136 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 BGNP21810 368 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 MPIP34949 423 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 ST13P50502 369 aaKnown RBP9.91□□□□□ -0.82
LINC00239-201ENST00000556973 RPL14P50914 215 aaKnown RBP9.91□□□□□ -0.82
LINC00239-201ENST00000556973 WDR4P57081 412 aaKnown RBP9.91□□□□□ -0.82
LINC00239-201ENST00000556973 NR6A1Q15406 480 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 CEBPEQ15744 281 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 PRR30Q53SZ7 412 aaPredicted RBP9.91□□□□□ -0.82
LINC00239-201ENST00000556973 PIGGQ5H8A4 983 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 CES4AQ5XG92 561 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 FAM71E1Q6IPT2 247 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 OPN5Q6U736 354 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 FAM180AQ6UWF9 173 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 LRRC25Q8N386 305 aaPredicted RBP9.91□□□□□ -0.82
LINC00239-201ENST00000556973 SLC15A4Q8N697 577 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 BCORP1Q8N888 145 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 ZNF615Q8N8J6 731 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 TMEM178AQ8NBL3 297 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 DOK4Q8TEW6 326 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 FAR1Q8WVX9 515 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 ASB15Q8WXK1 588 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 TP53INP1Q96A56 240 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 TMEM125Q96AQ2 219 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 FCRL1Q96LA6 429 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 PPP3R2Q96LZ3 170 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 RASL10BQ96S79 203 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 BRINP2Q9C0B6 783 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 C20orf27Q9GZN8 174 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 OR10A5Q9H207 317 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 ZNF395Q9H8N7 513 aaPredicted RBP9.91□□□□□ -0.82
LINC00239-201ENST00000556973 MIEF1Q9NQG6 463 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 SLC35C2Q9NQQ7 365 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 GIMAP4Q9NUV9 329 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 NKIRAS1Q9NYS0 192 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 TAS2R7Q9NYW3 318 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 ZNF639Q9UID6 485 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 NTNG1Q9Y2I2 539 aa9.91□□□□□ -0.82
LINC00239-201ENST00000556973 SPENQ96T58 3664 aaKnown RBP9.91□□□□□ -0.82
LINC00239-201ENST00000556973 C2orf92A0A1B0GVN3 265 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 A8MVJ9 347 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 TCP11X1B4DZS4 312 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 KLRC4-KLRK1H3BQV0 150 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 PYCARD-AS1I3L0S3 204 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 PEX11AO75192 247 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 LYPLA1O75608 230 aaPredicted RBP9.9□□□□□ -0.82
LINC00239-201ENST00000556973 SLC25A12O75746 678 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 BCAS2O75934 225 aaPredicted RBP9.9□□□□□ -0.82
LINC00239-201ENST00000556973 CRYABP02511 175 aaKnown RBP9.9□□□□□ -0.82
LINC00239-201ENST00000556973 CLPSP04118 112 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 S1PR1P21453 382 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 SSTR4P31391 388 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 MGAT2Q10469 447 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 MAPKAPK3Q16644 382 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 GALNTL6Q49A17 601 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 ATP6AP1LQ52LC2 224 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 XKR7Q5GH72 579 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 FAM180BQ6P0A1 224 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 IL20RBQ6UXL0 311 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 C16orf47Q6ZP98 133 aaPredicted RBP9.9□□□□□ -0.82
LINC00239-201ENST00000556973 ZNF227Q86WZ6 799 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 TICAM1Q8IUC6 712 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 TRIM42Q8IWZ5 723 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 C9orf40Q8IXQ3 194 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 CYP4Z2PQ8N1L4 340 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 VWA5B2Q8N398 1253 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 GOLGA6L1Q8N7Z2 621 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 ZNF781Q8N8C0 355 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 FAM98AQ8NCA5 519 aaKnown RBP9.9□□□□□ -0.82
LINC00239-201ENST00000556973 CDC26Q8NHZ8 85 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 RAB3IL1Q8TBN0 382 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 SLC22A8Q8TCC7 542 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 EXOSC8Q96B26 276 aaKnown RBP9.9□□□□□ -0.82
LINC00239-201ENST00000556973 ARL8AQ96BM9 186 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 CTHRC1Q96CG8 243 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 EGLN2Q96KS0 407 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 WWTR1Q9GZV5 400 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 KLHL1Q9NR64 748 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 HPF1Q9NWY4 346 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 MAT2BQ9NZL9 334 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 HAO1Q9UJM8 370 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 EXO1Q9UQ84 846 aaKnown RBP9.9□□□□□ -0.82
LINC00239-201ENST00000556973 ERVK-11Q9UQG0 969 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 ENTPD4Q9Y227 616 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 CFL2Q9Y281 166 aa9.9□□□□□ -0.82
LINC00239-201ENST00000556973 ATP6AP2A0A1C7CYW4 349 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 MYO1GB0I1T2 1018 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms