RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 FAM71E1Q6IPT2 247 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 FAM111BQ6SJ93 734 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 RNF165Q6ZSG1 346 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 SLC29A4Q7RTT9 530 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 TICAM1Q8IUC6 712 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 C9orf40Q8IXQ3 194 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 CCDC116Q8IYX3 515 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 LRRC25Q8N386 305 aaPredicted RBP15.86■□□□□ 0.13
PSEN1-217ENST00000556533 CLHC1Q8NHS4 586 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 ASB15Q8WXK1 588 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 EGLN2Q96KS0 407 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 ATP6V1G3Q96LB4 118 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 PPP3R2Q96LZ3 170 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 BBS4Q96RK4 519 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 HES7Q9BYE0 225 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 MYNNQ9NPC7 610 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 MIEF1Q9NQG6 463 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 BCAP29Q9UHQ4 241 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 BAIAP2L1Q9UHR4 511 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 ERVK-11Q9UQG0 969 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 ENTPD4Q9Y227 616 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 RAP2CQ9Y3L5 183 aa15.86■□□□□ 0.13
PSEN1-217ENST00000556533 VPS4BO75351 444 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 LRATO95237 230 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 DDCP20711 480 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 TRHRP34981 398 aaPredicted RBP15.85■□□□□ 0.13
PSEN1-217ENST00000556533 SLC18A1P54219 525 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 FOXK1P85037 733 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 SRSF11Q05519 484 aaKnown RBP15.85■□□□□ 0.13
PSEN1-217ENST00000556533 LTB4RQ15722 352 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 MAPKAPK3Q16644 382 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 TTMPQ5BVD1 217 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 IL20RBQ6UXL0 311 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 ATCAYQ86WG3 371 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 MDS2Q8NDY4 140 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 OR8K3Q8NH51 312 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 TMEM125Q96AQ2 219 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 MIB2Q96AX9 1013 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 TUBGCP3Q96CW5 907 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 METTL2AQ96IZ6 378 aaKnown RBP15.85■□□□□ 0.13
PSEN1-217ENST00000556533 ZNF681Q96N22 645 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 TSSK3Q96PN8 268 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 SORT1Q99523 831 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 VIPAS39Q9H9C1 493 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 SLC35C2Q9NQQ7 365 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 PNPOQ9NVS9 261 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 VPS4AQ9UN37 437 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 NTNG1Q9Y2I2 539 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.85■□□□□ 0.13
PSEN1-217ENST00000556533 WBP11Q9Y2W2 641 aaKnown RBP15.85■□□□□ 0.13
PSEN1-217ENST00000556533 BSNQ9UPA5 3926 aa15.85■□□□□ 0.13
PSEN1-217ENST00000556533 NPIPB8E9PQR5 432 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 SLC25A12O75746 678 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 NEURL1O76050 574 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 OR6B1O95007 311 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 ATP1B1P05026 303 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 SP1P08047 785 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 SDC1P18827 310 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 SLC37A1P57057 533 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 EXOSC7Q15024 291 aaKnown RBP15.84■□□□□ 0.13
PSEN1-217ENST00000556533 PRSS53Q2L4Q9 553 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 ATP6AP1LQ52LC2 224 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 HLA-DQA1Q5Y7H0 255 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 SLC25A25Q6KCM7 469 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 ANKRD26P1Q6NSI1 321 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 FAM180AQ6UWF9 173 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 SAMD14Q8IZD0 417 aaPredicted RBP15.84■□□□□ 0.13
PSEN1-217ENST00000556533 CYP4Z2PQ8N1L4 340 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 ARMC10Q8N2F6 343 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 VWA5B2Q8N398 1253 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.84■□□□□ 0.13
PSEN1-217ENST00000556533 GRHL3Q8TE85 626 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 RASL10BQ96S79 203 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 CCT7Q99832 543 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 C1orf50Q9BV19 199 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 OR10A5Q9H207 317 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 EHD3Q9NZN3 535 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 TMED5Q9Y3A6 229 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 DOCK10Q96BY6 2186 aa15.84■□□□□ 0.13
PSEN1-217ENST00000556533 A8MVJ9 347 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 SNUPNO95149 360 aaKnown RBP15.83■□□□□ 0.12
PSEN1-217ENST00000556533 RASAL1O95294 804 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 WISP1O95388 367 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 CLPSP04118 112 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 JUNP05412 331 aaKnown RBP15.83■□□□□ 0.12
PSEN1-217ENST00000556533 BCKDHAP12694 445 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 PCSK2P16519 638 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 MAPK1P28482 360 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 MPIP34949 423 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 SOX3P41225 446 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 MRPS35P82673 323 aaKnown RBP15.83■□□□□ 0.12
PSEN1-217ENST00000556533 PMP22Q01453 160 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 MGAT2Q10469 447 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 FUT7Q11130 342 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 MAP4K2Q12851 820 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 PRICKLE4Q2TBC4 344 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 TRMT12Q53H54 448 aaKnown RBP15.83■□□□□ 0.12
PSEN1-217ENST00000556533 XKR7Q5GH72 579 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 C6orf136Q5SQH8 315 aa15.83■□□□□ 0.12
PSEN1-217ENST00000556533 ATG16L1Q676U5 607 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms