RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ZNF197O14709 1029 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 SLC9A3R1O14745 358 aaPredicted RBP4.87□□□□□ -1.63
SRP54-211ENST00000556445 INSIG1O15503 277 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 SMAD6O43541 496 aaKnown RBP4.87□□□□□ -1.63
SRP54-211ENST00000556445 HCRTR2O43614 444 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 UGT1A9O60656 530 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 TBL1XO60907 577 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 SNNO75324 88 aaPredicted RBP4.87□□□□□ -1.63
SRP54-211ENST00000556445 NDUFS3O75489 264 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 PIAS1O75925 651 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 SLC16A8O95907 504 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 IL1AP01583 271 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 C2P06681 752 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 NPSP0C0P6 89 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 C8orf89P0DMQ9 161 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 MYL2P10916 166 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 HSPA8P11142 646 aaKnown RBP4.87□□□□□ -1.63
SRP54-211ENST00000556445 RALBP11234 206 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 MMP9P14780 707 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 CPA3P15088 417 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 AREGP15514 252 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 BGNP21810 368 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 GABRR2P28476 465 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 FMO4P31512 558 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 LEPRP48357 1165 aaKnown RBP4.87□□□□□ -1.63
SRP54-211ENST00000556445 PRKAG1P54619 331 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 RAB10P61026 200 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 RPS24P62847 133 aaKnown RBP4.87□□□□□ -1.63
SRP54-211ENST00000556445 TIAL1Q01085 375 aaKnown RBP eCLIP4.87□□□□□ -1.63
SRP54-211ENST00000556445 SULT2A1Q06520 285 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 RAD51Q06609 339 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 OVGP1Q12889 678 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 BNIP1Q12981 228 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 DMC1Q14565 340 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 TAF1AQ15573 450 aaPredicted RBP4.87□□□□□ -1.63
SRP54-211ENST00000556445 CHI3L2Q15782 390 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 CNGA3Q16281 694 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 FAM83EQ2M2I3 478 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 PCGF3Q3KNV8 242 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 PPM1LQ5SGD2 360 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 C1orf185Q5T7R7 199 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 C6orf163Q5TEZ5 329 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 ZNF470Q6ECI4 717 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 FAM45BPQ6NSW5 357 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 RFWD3Q6PCD5 774 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 CES3Q6UWW8 571 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 CLEC9AQ6UXN8 241 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 CDHR3Q6ZTQ4 885 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 MTSS1LQ765P7 747 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 TAS2R42Q7RTR8 314 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 CENPVQ7Z7K6 275 aaPredicted RBP4.87□□□□□ -1.63
SRP54-211ENST00000556445 SLC22A9Q8IVM8 553 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 MFN1Q8IWA4 741 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 ARHGAP24Q8N264 748 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 SLC25A41Q8N5S1 370 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 UXS1Q8NBZ7 420 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 OR2T34Q8NGX1 318 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 OR8K5Q8NH50 307 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 CFAP61Q8NHU2 1237 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 FAM45AQ8TCE6 357 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 PDCD6IPQ8WUM4 868 aaKnown RBP4.87□□□□□ -1.63
SRP54-211ENST00000556445 TMEM171Q8WVE6 324 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 C10orf82Q8WW14 230 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 INPP5DQ92835 1189 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 C14orf79Q96F83 325 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 ELMO2Q96JJ3 720 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 FAR2Q96K12 515 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 KLHL5Q96PQ7 755 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 INPP5KQ9BT40 448 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 ZSCAN5AQ9BUG6 496 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 TPPP3Q9BW30 176 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 NPLQ9BXD5 320 aaPredicted RBP4.87□□□□□ -1.63
SRP54-211ENST00000556445 RTN4RQ9BZR6 473 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 RAB33BQ9H082 229 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 UGT1A7Q9HAW7 530 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 UGT1A10Q9HAW8 530 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 UGT1A8Q9HAW9 530 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 NMRAL1Q9HBL8 299 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 POPDC3Q9HBV1 291 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 PALMDQ9NP74 551 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 SLCO1B3Q9NPD5 702 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 RPRD1BQ9NQG5 326 aaKnown RBP4.87□□□□□ -1.63
SRP54-211ENST00000556445 GKN1Q9NS71 199 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 PNPLA3Q9NST1 481 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 KLQ9UEF7 1012 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 A4GNTQ9UNA3 340 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 CMAHPQ9Y471 501 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 CPQQ9Y646 472 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 PLXNA4Q9HCM2 1894 aa4.87□□□□□ -1.63
SRP54-211ENST00000556445 KIAA1671Q9BY89 1806 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 OBSL1O75147 1896 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 A0A0A6YYC8 382 aaPredicted RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 A0A0D9SEW6 157 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 GOLGA8QA0A0J9YX86 632 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 LNP1A1A4G5 178 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 GOLGA8OA6NCC3 632 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 NPIPB13A6NJU9 1138 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 NPIPB5A8MRT5 1133 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 NPIPB4C9JG80 1138 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 C5orf67F2Z3F1 127 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms