RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 TMEM52Q8NDY8 209 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 OR7G1Q8NGA0 311 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 OR14A16Q8NHC5 309 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 ZNF675Q8TD23 568 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 NUDT8Q8WV74 236 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 UCN3Q969E3 161 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 KIAA1143Q96AT1 154 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 ELP4Q96EB1 424 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 SLC46A1Q96NT5 459 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 GPATCH1Q9BRR8 931 aaKnown RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 INPP5KQ9BT40 448 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 CRB3Q9BUF7 120 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 SOX17Q9H6I2 414 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 TPT1P8Q9HAU6 139 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 ADAP2Q9NPF8 381 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 PNO1Q9NRX1 252 aaKnown RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 THSD1Q9NS62 852 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 DDX18Q9NVP1 670 aaKnown RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 PRODH2Q9UF12 536 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 C3orf18Q9UK00 162 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 KCND3Q9UK17 655 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 FAF1Q9UNN5 650 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 FARSAQ9Y285 508 aaKnown RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 PCDHGB3Q9Y5G1 929 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 AK5Q9Y6K8 562 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 GVINP1Q7Z2Y8 2422 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 TCRBV16S1A1N1A0A5B0 115 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 FAM149AA5PLN7 773 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 DUXAA6NLW8 204 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 WASHC1A8K0Z3 465 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 C17orf105B2RV13 164 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 GSTA4O15217 222 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 PLOD3O60568 738 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 CD1EP15812 388 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 MAOAP21397 527 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 ME2P23368 584 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 SLC6A2P23975 617 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 CDKN2CP42773 168 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 CRATP43155 626 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 SLC7A2P52569 658 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 PRKAG1P54619 331 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 RHAGQ02094 409 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 CAPRIN1Q14444 709 aaKnown RBP8.63□□□□□ -1.03
ACTN1-218ENST00000556343 NCF4Q15080 339 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 ZNHIT3Q15649 155 aaPredicted RBP8.63□□□□□ -1.03
ACTN1-218ENST00000556343 CPZQ66K79 652 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 FAM180BQ6P0A1 224 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 ERICH5Q6P6B1 374 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 TMEM107Q6UX40 140 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 DNAJC14Q6Y2X3 702 aaPredicted RBP8.63□□□□□ -1.03
ACTN1-218ENST00000556343 ZNF517Q6ZMY9 492 aaPredicted RBP8.63□□□□□ -1.03
ACTN1-218ENST00000556343 C6orf120Q7Z4R8 191 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 SLC30A8Q8IWU4 369 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 MORN4Q8NDC4 146 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 NUP43Q8NFH3 380 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 OR52N2Q8NGI0 321 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 OR9A2Q8NGT5 310 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 ZFP90Q8TF47 636 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 POP5Q969H6 163 aaKnown RBP8.63□□□□□ -1.03
ACTN1-218ENST00000556343 TMEM125Q96AQ2 219 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 NACC2Q96BF6 587 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 NXPE2Q96DL1 559 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 NEURL3Q96EH8 262 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 FAM120BQ96EK7 910 aaKnown RBP8.63□□□□□ -1.03
ACTN1-218ENST00000556343 MAGED4Q96JG8 741 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 SLC35G5Q96KT7 338 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 KCTD14Q9BQ13 255 aaPredicted RBP8.63□□□□□ -1.03
ACTN1-218ENST00000556343 CADM1Q9BY67 442 aaKnown RBP8.63□□□□□ -1.03
ACTN1-218ENST00000556343 TRIM15Q9C019 465 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 VN1R1Q9GZP7 353 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 CXorf36Q9H7Y0 433 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 CXorf21Q9HAI6 301 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 NECTIN3Q9NQS3 549 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 SLC22A11Q9NSA0 550 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 ZCCHC3Q9NUD5 404 aaKnown RBP8.63□□□□□ -1.03
ACTN1-218ENST00000556343 VAPAQ9P0L0 249 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 SLAMF8Q9P0V8 285 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 TMEM181Q9P2C4 612 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 COPS7AQ9UBW8 275 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 CTSFQ9UBX1 484 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 C19orf53Q9UNZ5 99 aaPredicted RBP8.63□□□□□ -1.03
ACTN1-218ENST00000556343 PTRH2Q9Y3E5 179 aaKnown RBP8.63□□□□□ -1.03
ACTN1-218ENST00000556343 GMEB1Q9Y692 573 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 SEC16AO15027 2179 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 SCN3AQ9NY46 2000 aa8.63□□□□□ -1.03
ACTN1-218ENST00000556343 SPTBP11277 2137 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 IGKV3D-11A0A0A0MRZ8 115 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 TRBV5-3A0A0A0MS03 114 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 IDSB3KWA1 339 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 PRAMEF2O60811 474 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 JRKO75564 520 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 DXOO77932 396 aaKnown RBP8.62□□□□□ -1.03
ACTN1-218ENST00000556343 NQO1P15559 274 aaKnown RBP8.62□□□□□ -1.03
ACTN1-218ENST00000556343 GPX2P18283 190 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 MATN1P21941 496 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 MC3RP41968 323 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 KHKP50053 298 aa8.62□□□□□ -1.03
ACTN1-218ENST00000556343 CDK9P50750 372 aaKnown RBP8.62□□□□□ -1.03
ACTN1-218ENST00000556343 PGDP52209 483 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms