RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ZNF267Q14586 743 aaPredicted RBP10.69□□□□□ -0.7
SLIRP-205ENST00000556310 MAPKAPK3Q16644 382 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 IMPG1Q17R60 797 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 EIF2S3LQ2VIR3 472 aaKnown RBP10.69□□□□□ -0.7
SLIRP-205ENST00000556310 C6orf163Q5TEZ5 329 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 SCIMPQ6UWF3 145 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 RNF111Q6ZNA4 994 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 C16orf47Q6ZP98 133 aaPredicted RBP10.69□□□□□ -0.7
SLIRP-205ENST00000556310 TRIM46Q7Z4K8 759 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 MMP21Q8N119 569 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 SREK1Q8WXA9 508 aaKnown RBP10.69□□□□□ -0.7
SLIRP-205ENST00000556310 ASB15Q8WXK1 588 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 APIPQ96GX9 242 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 MECRQ9BV79 373 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 LIN28AQ9H9Z2 209 aaKnown RBP10.69□□□□□ -0.7
SLIRP-205ENST00000556310 CXorf21Q9HAI6 301 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 HPF1Q9NWY4 346 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 KLF13Q9Y2Y9 288 aaPredicted RBP10.69□□□□□ -0.7
SLIRP-205ENST00000556310 GNG14A0A1W2PPG7 69 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 AZIN1O14977 448 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 NPHS1O60500 1241 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 OR6B1O95007 311 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 AGFG2O95081 481 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 CLPSP04118 112 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 ATP1B1P05026 303 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 IL3P08700 152 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 DRD2P14416 443 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 CREB1P16220 341 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 PORP16435 677 aaPredicted RBP10.68□□□□□ -0.7
SLIRP-205ENST00000556310 MST1P26927 711 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 SERPINB3P29508 390 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 DEKP35659 375 aaKnown RBP10.68□□□□□ -0.7
SLIRP-205ENST00000556310 XKP51811 444 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 SLC37A1P57057 533 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 ZNF763Q0D2J5 394 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 HEPACAMQ14CZ8 416 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 EBPQ15125 230 aaKnown RBP10.68□□□□□ -0.7
SLIRP-205ENST00000556310 MPEG1Q2M385 716 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 SPDYAQ5MJ70 313 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 CLEC6AQ6EIG7 209 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 RNF165Q6ZSG1 346 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 SLC29A4Q7RTT9 530 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 CROCCP2Q86T23 111 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 HOMEZQ8IX15 550 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 POGLUT1Q8NBL1 392 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 PLPP7Q8NBV4 271 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 FAM76AQ8TAV0 307 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 SLC22A8Q8TCC7 542 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 KLHL29Q96CT2 875 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 METTL2AQ96IZ6 378 aaKnown RBP10.68□□□□□ -0.7
SLIRP-205ENST00000556310 EBPLQ9BY08 206 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 SHCBP1LQ9BZQ2 653 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 WWTR1Q9GZV5 400 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 SSU72Q9NP77 194 aaKnown RBP10.68□□□□□ -0.7
SLIRP-205ENST00000556310 TIMMDC1Q9NPL8 285 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 RRAGDQ9NQL2 400 aaPredicted RBP10.68□□□□□ -0.7
SLIRP-205ENST00000556310 PSME2Q9UL46 239 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 ERVK-11Q9UQG0 969 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 DLGAP4Q9Y2H0 992 aa10.68□□□□□ -0.7
SLIRP-205ENST00000556310 UTP20O75691 2785 aaKnown RBP10.68□□□□□ -0.7
SLIRP-205ENST00000556310 EML6Q6ZMW3 1958 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 NPIPB8E9PQR5 432 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 KLRC4-KLRK1H3BQV0 150 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 SEMA7AO75326 666 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 ERAL1O75616 437 aaKnown RBP10.67□□□□□ -0.7
SLIRP-205ENST00000556310 CHEK2O96017 543 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 CHRNGP07510 517 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 ANXA4P09525 319 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-205ENST00000556310 CT62P0C5K7 136 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 NEFHP12036 1026 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 ZNF24P17028 368 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 CSNK2A2P19784 350 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-205ENST00000556310 NT5EP21589 574 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 PRPH2P23942 346 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 SSTR4P31391 388 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 SERPINB5P36952 375 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 ETV4P43268 484 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 ALDH9A1P49189 494 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 ALDH6A1Q02252 535 aaKnown RBP10.67□□□□□ -0.7
SLIRP-205ENST00000556310 BTKQ06187 659 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 FUT7Q11130 342 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 ZNF750Q32MQ0 723 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 PIGGQ5H8A4 983 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 CEP85LQ5SZL2 805 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 KANK2Q63ZY3 851 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 OPN5Q6U736 354 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 IL20RBQ6UXL0 311 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 GFRALQ6UXV0 394 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 RTL4Q6ZR62 310 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 MDGA2Q7Z553 956 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-205ENST00000556310 SAMD14Q8IZD0 417 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-205ENST00000556310 DEPDC4Q8N2C3 294 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 LRRC25Q8N386 305 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-205ENST00000556310 VWA5B2Q8N398 1253 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 CPSF7Q8N684 471 aaKnown RBP10.67□□□□□ -0.7
SLIRP-205ENST00000556310 SLC15A4Q8N697 577 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 GOLM1Q8NBJ4 401 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 PSD4Q8NDX1 1056 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 DOK4Q8TEW6 326 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms