RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ZNF598Q86UK7 904 aaKnown RBP10.25□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF100Q8IYN0 542 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 MARVELD2Q8N4S9 558 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 FAM156AQ8NDB6 213 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 RPLP0P6Q8NHW5 317 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 SUN5Q8TC36 379 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 AMDHD1Q96NU7 426 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 C7orf50Q9BRJ6 194 aaKnown RBP10.25□□□□□ -0.77
ACTN1-216ENST00000556083 TIMM29Q9BSF4 260 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 OR6C2Q9NZP2 312 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 KCNN3Q9UGI6 736 aa10.25□□□□□ -0.77
ACTN1-216ENST00000556083 PHLPP1O60346 1717 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 NALCNQ8IZF0 1738 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 TP73O15350 636 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 SLURP2P0DP57 97 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 MAGEA6P43360 314 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 DAP3P51398 398 aaKnown RBP10.24□□□□□ -0.77
ACTN1-216ENST00000556083 UBE2NP61088 152 aaKnown RBP10.24□□□□□ -0.77
ACTN1-216ENST00000556083 TGFBR3Q03167 851 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 FBXO48Q5FWF7 155 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 C6orf141Q5SZD1 244 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 PAPD5Q8NDF8 572 aaKnown RBP10.24□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF384Q8TF68 577 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 C22orf15Q8WYQ4 148 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 C16orf58Q96GQ5 468 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 PGAM5Q96HS1 289 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 LMF2Q9BU23 707 aaKnown RBP10.24□□□□□ -0.77
ACTN1-216ENST00000556083 SLC22A7Q9Y694 548 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 A0A0G2JN53 185 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 CIB4A0PJX0 185 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 A6NCN8 305 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 A8MUI8 341 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 XPNPEP2O43895 674 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 MTX2O75431 263 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 TIMP1P01033 207 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 C6P13671 934 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 ADH6P28332 368 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 DSC1Q08554 894 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 AIMP2Q13155 320 aaKnown RBP10.24□□□□□ -0.77
ACTN1-216ENST00000556083 DOC2AQ14183 400 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 PTPRCAPQ14761 206 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 RNASE12Q5GAN4 147 aaKnown RBP10.24□□□□□ -0.77
ACTN1-216ENST00000556083 KANK2Q63ZY3 851 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 LIX1LQ8IVB5 337 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 SPTSSAQ969W0 71 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 BIRC8Q96P09 236 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 CASD1Q96PB1 797 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF700Q9H0M5 742 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 SPATA6Q9NWH7 488 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-216ENST00000556083 ADAM29Q9UKF5 820 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 NENFQ9UMX5 172 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 PIK3C2AO00443 1686 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 SMCO3A2RU48 225 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 C9JVG2 144 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF701M0R085 212 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-216ENST00000556083 KIAA0355O15063 1070 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 VILLO15195 856 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 PTHP01270 115 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 CYBAP13498 195 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 TAS2R31P59538 309 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 PSMA6P60900 246 aaKnown RBP10.24□□□□□ -0.77
ACTN1-216ENST00000556083 MRPS21P82921 87 aaKnown RBP10.24□□□□□ -0.77
ACTN1-216ENST00000556083 FGL2Q14314 439 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 NADK2Q4G0N4 442 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 FIGLAQ6QHK4 219 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 RAB11FIP2Q7L804 512 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 PIM3Q86V86 326 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 NEIL3Q8TAT5 605 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 FOXRED1Q96CU9 486 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-216ENST00000556083 TEPSINQ96N21 525 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 PKP2Q99959 881 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 CCDC86Q9H6F5 360 aaKnown RBP10.24□□□□□ -0.77
ACTN1-216ENST00000556083 RNF186Q9NXI6 227 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF69Q9UC07 566 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 ABCG2Q9UNQ0 655 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 TMEM98Q9Y2Y6 226 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 ADAM18Q9Y3Q7 739 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 INMT-MINDY4F8WBC2 141 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 TGM5O43548 720 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 RPP14O95059 124 aaKnown RBP10.24□□□□□ -0.77
ACTN1-216ENST00000556083 MT-CO2P00403 227 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 OPN1SWP03999 348 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 CHRM1P11229 460 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-216ENST00000556083 ADRB3P13945 408 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 PRKCAP17252 672 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 GCGRP47871 477 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 RIN1Q13671 783 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 RAB11BQ15907 218 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 ANKDD1AQ495B1 522 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 SCGB2B2Q4G0G5 96 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 UNC50Q53HI1 259 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 DPPA4Q7L190 304 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 SLC5A8Q8N695 610 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF675Q8TD23 568 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 PCYT2Q99447 389 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF175Q9Y473 711 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 ENPP4Q9Y6X5 453 aa10.24□□□□□ -0.77
ACTN1-216ENST00000556083 FMO6PO60774 539 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 PAK4O96013 591 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-216ENST00000556083 HK3P52790 923 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms