RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 ZNF267Q14586 743 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 GLE1Q53GS7 698 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 WLSQ5T9L3 541 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 GALNT12Q8IXK2 581 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 DMRTC2Q8IXT2 367 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 RPRMLQ8N4K4 120 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 ATP6V1E2Q96A05 226 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 MRRFQ96E11 262 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 PAFAH2Q99487 392 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 MRPL57Q9BQC6 102 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 MRPL46Q9H2W6 279 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 BRF2Q9HAW0 419 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 PROK2Q9HC23 129 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 ZBTB26Q9HCK0 441 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 NPDC1Q9NQX5 325 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 XPR1Q9UBH6 696 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 B4GALT7Q9UBV7 327 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 CNOT11Q9UKZ1 510 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 FAM215AQ9Y5M1 114 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 CACNA1CQ13936 2221 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 C2orf92A0A1B0GVN3 265 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 ATP6AP2A0A1C7CYW4 349 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 LRRC3CA6NJW4 275 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 GLOD5A6NK44 160 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 TP53I11O14683 189 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 CDH16O75309 829 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 GUCY1B2O75343 617 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 TRIM3O75382 744 aaPredicted RBP11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 ATP6AP2O75787 350 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 SNX4O95219 450 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 OTCP00480 354 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 ENDOUP21128 410 aaKnown RBP11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 PIK3R1P27986 724 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 TLE4Q04727 773 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 RPS6KA2Q15349 733 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 RTL6Q6ICC9 239 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 LCA5Q86VQ0 697 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 CLYBLQ8N0X4 340 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 METTL4Q8N3J2 472 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 ZNF615Q8N8J6 731 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 MNS1Q8NEH6 495 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 OR7G1Q8NGA0 311 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 OR10G3Q8NGC4 313 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 OR4K14Q8NGD5 310 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 NEIL3Q8TAT5 605 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 PHF21BQ96EK2 531 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 CDK15Q96Q40 435 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 GAL3ST4Q96RP7 486 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 LDAHQ9H6V9 325 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 SEMA4BQ9NPR2 832 aaPredicted RBP11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 TEX10Q9NXF1 929 aaPredicted RBP11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 KCNN3Q9UGI6 736 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 ACAD8Q9UKU7 415 aa11.68□□□□□ -0.54
HNRNPC-221ENST00000555883 C1orf226A1L170 272 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 PGRMC2O15173 223 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 URI1O94763 535 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 ACSL3O95573 720 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 ATP1B1P05026 303 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 CELA3AP09093 270 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 RFPL3SP0C7P2 107 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 GLI4P10075 376 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 NAGAP17050 411 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 ECHS1P30084 290 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 ARL1P40616 181 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 PEX19P40855 299 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 ZFP36L2P47974 494 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 NRG3P56975 720 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 RPP38P78345 283 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 SLC25A35Q3KQZ1 300 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 UBAP2Q5T6F2 1119 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 C1orf185Q5T7R7 199 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 RIPPLY2Q5TAB7 128 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 TTC19Q6DKK2 380 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 SLC48A1Q6P1K1 146 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 ZNF585AQ6P3V2 769 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 TMEM81Q6P7N7 255 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 MILR1Q7Z6M3 343 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 CCDC71Q8IV32 467 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 TMEM151AQ8N4L1 468 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 FAM13CQ8NE31 585 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 OR5M9Q8NGP3 310 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 ZNF483Q8TF39 744 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 DCAKDQ8WVC6 231 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 ADIPOR1Q96A54 375 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 NTNG2Q96CW9 530 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 ZNF597Q96LX8 424 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 DOHHQ9BU89 302 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 ELOVL6Q9H5J4 265 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 ZNF358Q9NW07 568 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 NMRK1Q9NWW6 199 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 TNFRSF10DQ9UBN6 386 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 DMGDHQ9UI17 866 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 CES1P1Q9UKY3 287 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 SNX6Q9UNH7 406 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 CFL2Q9Y281 166 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 NPFFR2Q9Y5X5 522 aa11.67□□□□□ -0.54
HNRNPC-221ENST00000555883 PHF3Q92576 2039 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 A0A087WUV0 522 aaPredicted RBP11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 A0A0G2JNJ9 132 aa11.66□□□□□ -0.54
HNRNPC-221ENST00000555883 NKX2-6A6NCS4 301 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms