RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SELENBP1Q13228 472 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 KCNJ8Q15842 424 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 SSX1Q16384 188 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 OCLNQ16625 522 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 HNRNPA1L2Q32P51 320 aaKnown RBP6.63□□□□□ -1.35
TDP1-213ENST00000555880 ARMC4Q5T2S8 1044 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 LCE2CQ5TA81 110 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 FAM46CQ5VWP2 391 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 C12orf73Q69YU5 71 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 TCTN3Q6NUS6 607 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 FAM180BQ6P0A1 224 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 BHLHB9Q6PI77 547 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 LYPD8Q6UX82 237 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 TMC5Q6UXY8 1006 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 FAM83HQ6ZRV2 1179 aaPredicted RBP6.63□□□□□ -1.35
TDP1-213ENST00000555880 ERN2Q76MJ5 926 aaKnown RBP6.63□□□□□ -1.35
TDP1-213ENST00000555880 LRRTM4Q86VH4 590 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 ADGRF3Q8IZF5 1079 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 CELF5Q8N6W0 485 aaKnown RBP6.63□□□□□ -1.35
TDP1-213ENST00000555880 MRPL43Q8N983 215 aaKnown RBP6.63□□□□□ -1.35
TDP1-213ENST00000555880 IL17RCQ8NAC3 791 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 PROKR2Q8NFJ6 384 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 OR5K2Q8NHB8 316 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 ING5Q8WYH8 240 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 ARRDC3Q96B67 414 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 TM4SF18Q96CE8 201 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 SLC35G5Q96KT7 338 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 DHRS1Q96LJ7 313 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 OPALINQ96PE5 141 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 TREX2Q9BQ50 279 aaPredicted RBP6.63□□□□□ -1.35
TDP1-213ENST00000555880 FNDC11Q9BVV2 318 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 FAIM2Q9BWQ8 316 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 TMEM165Q9HC07 324 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 WASH6PQ9NQA3 447 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 ACSS1Q9NUB1 689 aaPredicted RBP6.63□□□□□ -1.35
TDP1-213ENST00000555880 NDUFB11Q9NX14 153 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 TRPC4Q9UBN4 977 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 ADAM29Q9UKF5 820 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 SLC6A14Q9UN76 642 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 TRAPPC4Q9Y296 219 aa6.63□□□□□ -1.35
TDP1-213ENST00000555880 TCF20Q9UGU0 1960 aaKnown RBP6.63□□□□□ -1.35
TDP1-213ENST00000555880 A0A1W2PRQ8 180 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 C1QTNF3-AMACRE9PGA6 284 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 KMOO15229 486 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 OR1F1O43749 312 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 GPX5O75715 221 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 KCNK2O95069 426 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 RAB36O95755 333 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 RECKO95980 971 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 SERPIND1P05546 499 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 CKMT1AP12532 417 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 DRD2P14416 443 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 SPNP16150 400 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 TNNI3P19429 210 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 MAGP20916 626 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 GSTM3P21266 225 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 HOXD12P35452 270 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 CASP3P42574 277 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 SSR2P43308 183 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 MAGEA10P43363 369 aaPredicted RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 LBX1P52954 281 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 METAP1P53582 386 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 PCBP4P57723 403 aaKnown RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 ERVFC1P60507 584 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 TRA2BP62995 288 aaKnown RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 REEP5Q00765 189 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 ALDH6A1Q02252 535 aaKnown RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 MLLT11Q13015 90 aaPredicted RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 SEC23BQ15437 767 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 CARTPTQ16568 116 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 TMEM52BQ4KMG9 183 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 KLHL22Q53GT1 634 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 MFSD4BQ5TF39 518 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 RNLSQ5VYX0 342 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 KIAA1211LQ6NV74 962 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 ZNF544Q6NX49 715 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 TMEM53Q6P2H8 277 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 PGBD2Q6P3X8 592 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 ADAMTSL4Q6UY14 1074 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 TMPRSS11AQ6ZMR5 421 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 ADCK2Q7Z695 626 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 GRASPQ7Z6J2 395 aaPredicted RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 GJD3Q8N144 294 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 TCEANCQ8N8B7 351 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 ANKRD53Q8N9V6 530 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 GALNT6Q8NCL4 622 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 GPR32P1Q8NGA4 272 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 BBS10Q8TAM1 723 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 ZSWIM3Q96MP5 696 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 TSSK6Q9BXA6 273 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 POLR2J2Q9GZM3 115 aaKnown RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 MIR1-1HGQ9H1L0 117 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 MTIF3Q9H2K0 278 aaKnown RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 NT5DC2Q9H857 520 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 HHATLQ9HCP6 504 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 SLAMF7Q9NQ25 335 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 SNTG1Q9NSN8 517 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 CUEDC1Q9NWM3 386 aaPredicted RBP6.62□□□□□ -1.35
TDP1-213ENST00000555880 TVP23BQ9NYZ1 205 aa6.62□□□□□ -1.35
TDP1-213ENST00000555880 NPAP1Q9NZP6 1156 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms