RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, human

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT2-221	ENST00000555773	MRPS18B	Q9Y676	258 aa	Known RBP	11.65	□□□□□ -0.54
SHMT2-221	ENST00000555773	WDFY3	Q8IZQ1	3526 aa		11.65	□□□□□ -0.54
SHMT2-221	ENST00000555773	FER1L5	A0AVI2	2057 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	APC2	O95996	2303 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773		A0A087WV62	115 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	IGHV1-45	A0A0A0MS14	117 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773		A0A1W2PS29	197 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	TMEM8B	A6NDV4	472 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	SAGE2P	A6NJ88	616 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	ZNF891	A8MT65	544 aa	Predicted RBP	11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	RFXANK	O14593	260 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	ERN1	O75460	977 aa	Known RBP	11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	CPSF4	O95639	269 aa	Known RBP	11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	C6orf47	O95873	294 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	NPPA	P01160	153 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	ZCCHC18	P0CG32	403 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	COX4I1	P13073	169 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	CAPN3	P20807	821 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	GPC1	P35052	558 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	MNAT1	P51948	309 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	HBA1	P69905	142 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	DUSP2	Q05923	314 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	MGAT2	Q10469	447 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	FUT7	Q11130	342 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	ZNF267	Q14586	743 aa	Predicted RBP	11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	EXT1	Q16394	746 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	MMEL1	Q495T6	779 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	ZNF628	Q5EBL2	1059 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	FAM69B	Q5VUD6	431 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	PAPD4	Q6PIY7	484 aa	Known RBP	11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	UNQ6494/PRO21346	Q6UXR6	183 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	TMEM64	Q6YI46	380 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	SNX32	Q86XE0	403 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	TREML1	Q86YW5	311 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	DPP10	Q8N608	796 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	TRIML2	Q8N7C3	387 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	ZSCAN1	Q8NBB4	408 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	PCYOX1L	Q8NBM8	494 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	OR7G1	Q8NGA0	311 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	OR4A15	Q8NGL6	344 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	OR9A2	Q8NGT5	310 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	MOAP1	Q96BY2	351 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	SENP5	Q96HI0	755 aa	Predicted RBP	11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	PHF12	Q96QT6	1004 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	PANX1	Q96RD7	426 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	WDR77	Q9BQA1	342 aa	Predicted RBP	11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	C3orf14	Q9HBI5	128 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	SERHL	Q9NQF3	203 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	P4HTM	Q9NXG6	502 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	MAT2B	Q9NZL9	334 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	NTM	Q9P121	344 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	ZNF639	Q9UID6	485 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	MAN2B2	Q9Y2E5	1009 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	ACACA	Q13085	2346 aa		11.64	□□□□□ -0.55
SHMT2-221	ENST00000555773	NSG1	A0A0A6YYJ2	146 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	CCT8L1P	A6NM43	557 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773		A8MUA0	341 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	HP	P00738	406 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	COX6A1	P12074	109 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	CD1E	P15812	388 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	S1PR1	P21453	382 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	UQCRC2	P22695	453 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	GPR143	P51810	404 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	AP2B1	P63010	937 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	FOXK2	Q01167	660 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	GABPB1	Q06547	395 aa	Predicted RBP	11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	HSPB3	Q12988	150 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	IL10RA	Q13651	578 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	PCOLCE	Q15113	449 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	BROX	Q5VW32	411 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	BHLHB9	Q6PI77	547 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	FAM111B	Q6SJ93	734 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	LRRC69	Q6ZNQ3	347 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	DGAT2L6	Q6ZPD8	337 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	MRGPRE	Q86SM8	312 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	ANKRD46	Q86W74	232 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	CLECL1	Q8IZS7	167 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	OR2L13	Q8N349	312 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	VWA5B2	Q8N398	1253 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	NFAM1	Q8NET5	270 aa	Predicted RBP	11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	B3GNT7	Q8NFL0	401 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	ADCY4	Q8NFM4	1077 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	M1AP	Q8TC57	530 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	C8orf44	Q96CB5	159 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	FBXL20	Q96IG2	436 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	NSL1	Q96IY1	281 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	IMMP1L	Q96LU5	166 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	FER1L6-AS2	Q96M78	137 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	EFCAB1	Q9HAE3	211 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	11.63	□□□□□ -0.55	6e-6	■■□□□ 12.1
SHMT2-221	ENST00000555773	TAGLN3	Q9UI15	199 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	VPS4A	Q9UN37	437 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	C19orf53	Q9UNZ5	99 aa	Predicted RBP	11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	ERVK-11	Q9UQG0	969 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	CFL2	Q9Y281	166 aa		11.63	□□□□□ -0.55
SHMT2-221	ENST00000555773	URB1	O60287	2271 aa	Known RBP	11.62	□□□□□ -0.55
SHMT2-221	ENST00000555773		A0A096LPI6	279 aa		11.62	□□□□□ -0.55
SHMT2-221	ENST00000555773	IGHV3-20	A0A0C4DH32	117 aa		11.62	□□□□□ -0.55
SHMT2-221	ENST00000555773	ASPDH	A6ND91	283 aa		11.62	□□□□□ -0.55
SHMT2-221	ENST00000555773	C1QTNF9B	B2RNN3	333 aa		11.62	□□□□□ -0.55

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