RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 CIDEBQ9UHD4 219 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 MRTO4Q9UKD2 239 aaKnown RBP2.61□□□□□ -1.99
SCFD1-216ENST00000555550 CDH7Q9ULB5 785 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 TRIOBPQ9H2D6 2365 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 IGHV3-35A0A0C4DH35 117 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 SH3PXD2BA1X283 911 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 A8MX80 341 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 PSMD3O43242 534 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 NME6O75414 186 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-216ENST00000555550 DUSP14O95147 198 aaKnown RBP2.6□□□□□ -1.99
SCFD1-216ENST00000555550 GJB5O95377 273 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 P2RY4P51582 365 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 CD47Q08722 323 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 PAN3Q58A45 887 aaKnown RBP2.6□□□□□ -1.99
SCFD1-216ENST00000555550 ZNF658Q5TYW1 1059 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-216ENST00000555550 ZNF544Q6NX49 715 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 MOB2Q70IA6 237 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 ASPGQ86U10 573 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 LAX1Q8IWV1 398 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 Q8N9G6 341 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-216ENST00000555550 RELL2Q8NC24 303 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-216ENST00000555550 PIWIL1Q96J94 861 aaKnown RBP2.6□□□□□ -1.99
SCFD1-216ENST00000555550 CXorf58Q96LI9 332 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 GUCD1Q96NT3 240 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 ST6GALNAC5Q9BVH7 336 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 UTP14AQ9BVJ6 771 aaKnown RBP2.6□□□□□ -1.99
SCFD1-216ENST00000555550 NUSAP1Q9BXS6 441 aaKnown RBP2.6□□□□□ -1.99
SCFD1-216ENST00000555550 NAPBQ9H115 298 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 IKZF5Q9H5V7 419 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 TECRQ9NZ01 308 aaKnown RBP2.6□□□□□ -1.99
SCFD1-216ENST00000555550 EXOC7Q9UPT5 735 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 KCNK6Q9Y257 313 aa2.6□□□□□ -1.99
SCFD1-216ENST00000555550 MTF2Q9Y483 593 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-216ENST00000555550 C13orf42A0A1B0GVH6 325 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 EPOPA6NHQ4 379 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 CPNE6O95741 557 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 SLC16A8O95907 504 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 CHRNGP07510 517 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 HSP90AA1P07900 732 aaKnown RBP2.59□□□□□ -1.99
SCFD1-216ENST00000555550 LAMP1P11279 417 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 RBP5P82980 135 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 HSPA14Q0VDF9 509 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 GIT2Q14161 759 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 NFE2L1Q14494 772 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 QRICH1Q2TAL8 776 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 GLRX5Q86SX6 157 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 ITIH5Q86UX2 942 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 TMEM126BQ8IUX1 230 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 APOBEC3FQ8IUX4 373 aaKnown RBP2.59□□□□□ -1.99
SCFD1-216ENST00000555550 CCDC83Q8IWF9 413 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 NUP93Q8N1F7 819 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 OR7G3Q8NG95 312 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 ZNF564Q8TBZ8 553 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-216ENST00000555550 BIRC7Q96CA5 298 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 ZNF285Q96NJ3 590 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 PRAM1Q96QH2 718 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 SPAG8Q99932 426 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-216ENST00000555550 MLPHQ9BV36 600 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-216ENST00000555550 TMEM206Q9H813 350 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 KLHL21Q9UJP4 597 aa2.59□□□□□ -1.99
SCFD1-216ENST00000555550 CFAP65Q6ZU64 1925 aaKnown RBP2.59□□□□□ -1.99
SCFD1-216ENST00000555550 AFF2P51816 1311 aa2.59□□□□□ -2
SCFD1-216ENST00000555550 WI2-2373I1.2A0A1W2PRP0 233 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 ZFP92A6NM28 416 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 TTI1O43156 1089 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 TIMM44O43615 452 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 STAM2O75886 525 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 ACTL6AO96019 429 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 NUDT17P0C025 328 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 UCP1P25874 307 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 STIP1P31948 543 aaKnown RBP2.58□□□□□ -2
SCFD1-216ENST00000555550 TRPC1P48995 793 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 TNFSF10P50591 281 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 ARHGDIBP52566 201 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 ST8SIA6P61647 398 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 CDKL1Q00532 357 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 ASAH1Q13510 395 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 SERTAD2Q14140 314 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 WSCD1Q658N2 575 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 STEAP1BQ6NZ63 245 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 ZNF530Q6P9A1 599 aaPredicted RBP2.58□□□□□ -2
SCFD1-216ENST00000555550 ADGRD2Q7Z7M1 963 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 LUZP1Q86V48 1076 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 SIAH3Q8IW03 269 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 TEKT1Q969V4 418 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 VSIG2Q96IQ7 327 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 PANX3Q96QZ0 392 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 ACPTQ9BZG2 426 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 SLC9A8Q9Y2E8 581 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 TNRQ92752 1358 aa2.58□□□□□ -2
SCFD1-216ENST00000555550 YJEFN3A6XGL0 299 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 PSMA7O14818 248 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 TSPAN2O60636 221 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 GMNNO75496 209 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 CT45A8P0DMV1 189 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 CT45A9P0DMV2 189 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 PVRP15151 417 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 B4GALT1P15291 398 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 IDSP22304 550 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 SERPINB6P35237 376 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms