RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ING2Q9H160 280 aa11.83□□□□□ -0.52
SYNE2-219ENST00000555323 MAT2BQ9NZL9 334 aa11.83□□□□□ -0.52
SYNE2-219ENST00000555323 G3BP2Q9UN86 482 aaKnown RBP11.83□□□□□ -0.52
SYNE2-219ENST00000555323 MAN2B2Q9Y2E5 1009 aa11.83□□□□□ -0.52
SYNE2-219ENST00000555323 IGF2RP11717 2491 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 A0A087WV62 115 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 PRSS51A0A1B0GVH4 220 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 FAM234BA2RU67 622 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 RNASET2O00584 256 aaKnown RBP11.82□□□□□ -0.52
SYNE2-219ENST00000555323 PDPK1O15530 556 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 DYRK3O43781 588 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 PLOD3O60568 738 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 SEC24DO94855 1032 aaPredicted RBP11.82□□□□□ -0.52
SYNE2-219ENST00000555323 ITGB2P05107 769 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 SERPINA7P05543 415 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 PGRP06401 933 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 CT62P0C5K7 136 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 NCF2P19878 526 aaPredicted RBP11.82□□□□□ -0.52
SYNE2-219ENST00000555323 NT5EP21589 574 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 NTSP30990 170 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 KIR3DL1P43629 444 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 MANFP55145 182 aaKnown RBP11.82□□□□□ -0.52
SYNE2-219ENST00000555323 NME5P56597 212 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 LRRC74AQ0VAA2 488 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 DEFB109BQ30KR1 87 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 FAM174BQ3ZCQ3 159 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 ZNF628Q5EBL2 1059 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 SPANXN4Q5MJ08 99 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 H3F3CQ6NXT2 135 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 BLOC1S3Q6QNY0 202 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 GALNT12Q8IXK2 581 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 ARMC10Q8N2F6 343 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 OR7G1Q8NGA0 311 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 OR8K3Q8NH51 312 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 TSPEARQ8WU66 669 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 APOBEC4Q8WW27 367 aaKnown RBP11.82□□□□□ -0.52
SYNE2-219ENST00000555323 OR5P2Q8WZ92 322 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 CIDECQ96AQ7 238 aaPredicted RBP11.82□□□□□ -0.52
SYNE2-219ENST00000555323 ART5Q96L15 291 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 ZBTB18Q99592 522 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 ZNF160Q9HCG1 818 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 SLC52A3Q9NQ40 469 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 SAR1AQ9NR31 198 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 NTMQ9P121 344 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 ERVK-11Q9UQG0 969 aa11.82□□□□□ -0.52
SYNE2-219ENST00000555323 TPRP12270 2363 aaKnown RBP11.81□□□□□ -0.52
SYNE2-219ENST00000555323 A0A1W2PRB8 838 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 DYTNA2CJ06 578 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 ARGFXA6NJG6 315 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 SLC22A2O15244 555 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 CCDC22O60826 627 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 CEACAM4O75871 244 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 BCAS2O75934 225 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-219ENST00000555323 CLPSP04118 112 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 S100A3P33764 101 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 CLCN2P51788 898 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 NCBP2P52298 156 aaKnown RBP eCLIP11.81□□□□□ -0.52
SYNE2-219ENST00000555323 POLR2JP52435 117 aaKnown RBP11.81□□□□□ -0.52
SYNE2-219ENST00000555323 CXADRP78310 365 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 SF3A3Q12874 501 aaKnown RBP eCLIP11.81□□□□□ -0.52
SYNE2-219ENST00000555323 CHAF1BQ13112 559 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 RCAN2Q14206 197 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 ZNF267Q14586 743 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-219ENST00000555323 BTBD16Q32M84 506 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 PGS1Q32NB8 556 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 FHL5Q5TD97 284 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 ANXA8L1Q5VT79 327 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 OR4F3Q6IEY1 312 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 JMJD6Q6NYC1 403 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-219ENST00000555323 FAM111BQ6SJ93 734 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 MSANTD1Q6ZTZ1 278 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 GPR155Q7Z3F1 870 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 KBTBD2Q8IY47 623 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 AMER2Q8N7J2 671 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 ZNF615Q8N8J6 731 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 ANKS4BQ8N8V4 417 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 CLEC1AQ8NC01 280 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 VPS37AQ8NEZ2 397 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 OR9I1Q8NGQ6 314 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 OR9A2Q8NGT5 310 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 ZFP28Q8NHY6 868 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 SLC2A12Q8TD20 617 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 PSMF1Q92530 271 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 ELP4Q96EB1 424 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 VMP1Q96GC9 406 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 FAM107BQ9H098 131 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 FAM120CQ9NX05 1096 aaKnown RBP11.81□□□□□ -0.52
SYNE2-219ENST00000555323 BTNL2Q9UIR0 455 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 ZNF223Q9UK11 482 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-219ENST00000555323 CFAP47Q6ZTR5 3102 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 LAMA5O15230 3695 aa11.81□□□□□ -0.52
SYNE2-219ENST00000555323 CHD8Q9HCK8 2581 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 MASP2O00187 686 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 HRKO00198 91 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 PGDP52209 483 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 DGKQP52824 942 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 SLC37A1P57057 533 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 LTB4RQ15722 352 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 TBR1Q16650 682 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 TRMT12Q53H54 448 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms