RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 MMP21Q8N119 569 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 VWA5B2Q8N398 1253 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 ANKRD42Q8N9B4 389 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 NUBPLQ8TB37 319 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 DOK4Q8TEW6 326 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 TWIST2Q8WVJ9 160 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 UCN3Q969E3 161 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 EXOSC8Q96B26 276 aaKnown RBP11.23□□□□□ -0.61
SRP54-206ENST00000555317 BBS4Q96RK4 519 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 RASL10BQ96S79 203 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 LIN28AQ9H9Z2 209 aaKnown RBP11.23□□□□□ -0.61
SRP54-206ENST00000555317 CXorf21Q9HAI6 301 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 LRTM1Q9HBL6 345 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 SIRT5Q9NXA8 310 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 NKIRAS1Q9NYS0 192 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 NTNG1Q9Y2I2 539 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 WBP11Q9Y2W2 641 aaKnown RBP11.23□□□□□ -0.61
SRP54-206ENST00000555317 KLF13Q9Y2Y9 288 aaPredicted RBP11.23□□□□□ -0.61
SRP54-206ENST00000555317 TMEM114B3SHH9 223 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 TMEM233B4DJY2 109 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 KLRC4-KLRK1H3BQV0 150 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 HRKO00198 91 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 NME2P1O60361 137 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 NEURL1O76050 574 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 SNUPNO95149 360 aaKnown RBP11.22□□□□□ -0.61
SRP54-206ENST00000555317 IGKV3-11P04433 115 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 ATP1B1P05026 303 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 EDN3P14138 238 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 NME2P22392 152 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 MAPK1P28482 360 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 NTSP30990 170 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 SOX3P41225 446 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 PMP22Q01453 160 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 C2orf80Q0P641 193 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 MPEG1Q2M385 716 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 GALNTL6Q49A17 601 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 ZNF468Q5VIY5 522 aaPredicted RBP11.22□□□□□ -0.61
SRP54-206ENST00000555317 NOXRED1Q6NXP6 359 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 IL20RBQ6UXL0 311 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 C16orf47Q6ZP98 133 aaPredicted RBP11.22□□□□□ -0.61
SRP54-206ENST00000555317 RNF165Q6ZSG1 346 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 IKBIPQ70UQ0 350 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 C9orf40Q8IXQ3 194 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 KIRREL3Q8IZU9 778 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 TAGAPQ8N103 731 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 GOLGA6L1Q8N7Z2 621 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 ST6GALNAC3Q8NDV1 305 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 OR7G1Q8NGA0 311 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 PRR7Q8TB68 274 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 NR4A3Q92570 626 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 SCMH1Q96GD3 660 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 CCT7Q99832 543 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 HES7Q9BYE0 225 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 WWTR1Q9GZV5 400 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 TRIM45Q9H8W5 580 aaPredicted RBP11.22□□□□□ -0.61
SRP54-206ENST00000555317 MYNNQ9NPC7 610 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 EHD3Q9NZN3 535 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 HEY2Q9UBP5 337 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 BCAP29Q9UHQ4 241 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 CES1P1Q9UKY3 287 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 CFL2Q9Y281 166 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 TMED5Q9Y3A6 229 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 DNAJC15Q9Y5T4 150 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 PTGDR2Q9Y5Y4 395 aa11.22□□□□□ -0.61
SRP54-206ENST00000555317 DOPEY2Q9Y3R5 2298 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 DIDO1Q9BTC0 2240 aaKnown RBP11.21□□□□□ -0.61
SRP54-206ENST00000555317 C2orf92A0A1B0GVN3 265 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 A0A1W2PS29 197 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 PIP5K1BO14986 540 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 SKAP2O75563 359 aaPredicted RBP11.21□□□□□ -0.61
SRP54-206ENST00000555317 OR6B1O95007 311 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 FGF4P08620 206 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 ZNF24P17028 368 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 DDX5P17844 614 aaKnown RBP11.21□□□□□ -0.61
SRP54-206ENST00000555317 DDCP20711 480 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 PRPH2P23942 346 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 GRK2P25098 689 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 SSTR4P31391 388 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 MPIP34949 423 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 NRG3P56975 720 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 SLC37A1P57057 533 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 MAGOHP61326 146 aaKnown RBP11.21□□□□□ -0.61
SRP54-206ENST00000555317 RPL38P63173 70 aaKnown RBP11.21□□□□□ -0.61
SRP54-206ENST00000555317 ALDH6A1Q02252 535 aaKnown RBP11.21□□□□□ -0.61
SRP54-206ENST00000555317 MRPL49Q13405 166 aaKnown RBP11.21□□□□□ -0.61
SRP54-206ENST00000555317 CASP8Q14790 479 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 ZNF750Q32MQ0 723 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 ATP6AP1LQ52LC2 224 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 TNFAIP8L3Q5GJ75 292 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 FHL5Q5TD97 284 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 RTL4Q6ZR62 310 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.21□□□□□ -0.61
SRP54-206ENST00000555317 DND1Q8IYX4 353 aaKnown RBP11.21□□□□□ -0.61
SRP54-206ENST00000555317 SLC15A4Q8N697 577 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 ADCY4Q8NFM4 1077 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 MGARPQ8TDB4 240 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 SGCZQ96LD1 299 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 PPP3R2Q96LZ3 170 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 TAAR6Q96RI8 345 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 BARD1Q99728 777 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms