RNA–Protein interactions for RNA: ENST00000555034.5

FOXN3-208, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-208ENST00000555034 SCO2A0A1W2PP80 73 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 TCRBV9S1A1TA0A576 114 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 FAM90A27PA6NNH2 459 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 FAM166BA8MTA8 275 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 TGFBR3LH3BV60 316 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 FOXE1O00358 373 aaPredicted RBP7.09□□□□□ -1.27
FOXN3-208ENST00000555034 TP73O15350 636 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 PROM1O43490 865 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 RRP9O43818 475 aaKnown RBP7.09□□□□□ -1.27
FOXN3-208ENST00000555034 PRKNO60260 465 aaPredicted RBP7.09□□□□□ -1.27
FOXN3-208ENST00000555034 OR10H2O60403 315 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 LDB3O75112 727 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 FAM155BO75949 473 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 SEMA3DO95025 777 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 TBX6O95947 436 aaPredicted RBP7.09□□□□□ -1.27
FOXN3-208ENST00000555034 FBXO45P0C2W1 286 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 SLC35E2BP0CK96 405 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 SLC35E2P0CK97 266 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 GLI4P10075 376 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 FOSL1P15407 271 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 TIMP3P35625 211 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 MAGEA5P43359 124 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 HNRNPFP52597 415 aaKnown RBP7.09□□□□□ -1.27
FOXN3-208ENST00000555034 TNFRSF17Q02223 184 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 ASPHQ12797 758 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 SLAMF1Q13291 335 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 ZNF460Q14592 562 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 NTRK2Q16620 822 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 ZNF750Q32MQ0 723 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 C6orf163Q5TEZ5 329 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 HLA-DQA1Q5Y7H0 255 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 ARSKQ6UWY0 536 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 RNF111Q6ZNA4 994 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 PAGE2Q7Z2X7 111 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 ISCA2Q86U28 154 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 TMEM200AQ86VY9 491 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 LACC1Q8IV20 430 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 CTAGE3PQ8IX95 158 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 AMER2Q8N7J2 671 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 TMEM52Q8NDY8 209 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 OR7G1Q8NGA0 311 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 NEIL3Q8TAT5 605 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 FAM222BQ8WU58 562 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 RIT1Q92963 219 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 ANKRD9Q96BM1 317 aaPredicted RBP7.09□□□□□ -1.27
FOXN3-208ENST00000555034 NTNG2Q96CW9 530 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 HSPBAP1Q96EW2 488 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 CSF3RQ99062 836 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 FMO2Q99518 471 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 MAPKAP1Q9BPZ7 522 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 WDR83Q9BRX9 315 aaKnown RBP7.09□□□□□ -1.27
FOXN3-208ENST00000555034 CXXC4Q9H2H0 198 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 ZNF703Q9H7S9 590 aaPredicted RBP7.09□□□□□ -1.27
FOXN3-208ENST00000555034 DDX31Q9H8H2 851 aaKnown RBP7.09□□□□□ -1.27
FOXN3-208ENST00000555034 SH2D2AQ9NP31 389 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 SAYSD1Q9NPB0 183 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 ZNF446Q9NWS9 450 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 ADAM29Q9UKF5 820 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 HRH3Q9Y5N1 445 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 SVILO95425 2214 aa7.09□□□□□ -1.27
FOXN3-208ENST00000555034 ANKRD17O75179 2603 aaKnown RBP7.09□□□□□ -1.27
FOXN3-208ENST00000555034 ADGRG4Q8IZF6 3080 aa7.09□□□□□ -1.28
FOXN3-208ENST00000555034 DCHS2Q6V1P9 2916 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 C2orf92A0A1B0GVN3 265 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 ATP6AP2A0A1C7CYW4 349 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 NKX2-6A6NCS4 301 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 PHGDHO43175 533 aaKnown RBP7.08□□□□□ -1.28
FOXN3-208ENST00000555034 FGF17O60258 216 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 ATP6AP2O75787 350 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 ETHE1O95571 254 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 EPPINO95925 133 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 TGFB1P01137 390 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 IL2RAP01589 272 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 C1QAP02745 245 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 PCNAP12004 261 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 CD22P20273 847 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 SSTR1P30872 391 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 GPC1P35052 558 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 KIR2DL3P43628 341 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 ST13P50502 369 aaKnown RBP7.08□□□□□ -1.28
FOXN3-208ENST00000555034 ASCL1P50553 236 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 ART1P52961 327 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 PGGT1BP53609 377 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 ALDH18A1P54886 795 aaKnown RBP7.08□□□□□ -1.28
FOXN3-208ENST00000555034 PPP2R2AP63151 447 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 SORDQ00796 357 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 SNTA1Q13424 505 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 FASTKD3Q14CZ7 662 aaKnown RBP7.08□□□□□ -1.28
FOXN3-208ENST00000555034 RPS6KA2Q15349 733 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 PCBP2Q15366 365 aaKnown RBP eCLIP7.08□□□□□ -1.286e-8■■■■■ 35.6
FOXN3-208ENST00000555034 OR4D1Q15615 310 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 KCTD19Q17RG1 926 aaPredicted RBP7.08□□□□□ -1.28
FOXN3-208ENST00000555034 NHSL2Q5HYW2 709 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 OR52E8Q6IFG1 317 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 TMEM81Q6P7N7 255 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 MYO7BQ6PIF6 2116 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 CYP20A1Q6UW02 462 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 LRIG3Q6UXM1 1119 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 ZNF793Q6ZN11 406 aa7.08□□□□□ -1.28
FOXN3-208ENST00000555034 UBE3DQ7Z6J8 389 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms