RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 STRADAQ7RTN6 431 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 MRPL21Q7Z2W9 205 aaKnown RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 CHPT1Q8WUD6 406 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 MRPL38Q96DV4 380 aaKnown RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ACBD6Q9BR61 282 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 GINS3Q9BRX5 216 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ST6GALNAC5Q9BVH7 336 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 LRRC3Q9BY71 257 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 SDCBP2Q9H190 292 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 OBP2BQ9NPH6 170 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF358Q9NW07 568 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 MGAT4BQ9UQ53 548 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 FEZF1A0PJY2 475 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 BTNL10A8MVZ5 291 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ANXA8P13928 327 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 FOLR3P41439 243 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 CDKN2BP42772 138 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 GRIN2CQ14957 1233 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 LIN52Q52LA3 116 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 SLC18B1Q6NT16 456 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 C22orf39Q6P5X5 142 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ASPGQ86U10 573 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 DCUN1D3Q8IWE4 304 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 TMEM151AQ8N4L1 468 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 SLC2A12Q8TD20 617 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 TOMM40LQ969M1 308 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF641Q96N77 438 aaPredicted RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 SNX18Q96RF0 628 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 IKZF4Q9H2S9 585 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 FAM230AA0A1W2PPH8 454 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 GJE1A6NN92 205 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 D6RAR5 112 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ARVCFO00192 962 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 IL3P08700 152 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 PTPN6P29350 595 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 HOXA9P31269 272 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 TMEM201Q5SNT2 666 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 PLEKHG7Q6ZR37 379 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 BPHLQ86WA6 291 aaPredicted RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 GID4Q8IVV7 300 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 REM2Q8IYK8 340 aaPredicted RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 BBS1Q8NFJ9 593 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 SLC35F5Q8WV83 523 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 SLC29A3Q9BZD2 475 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 GABRR1P24046 479 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 GGT5P36269 586 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 C1orf61Q13536 156 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 FGL2Q14314 439 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ADGRF1Q5T601 910 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 TMEM236Q5W0B7 351 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 METTL2BQ6P1Q9 378 aaKnown RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 OR51D1Q8NGF3 324 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 IL1F10Q8WWZ1 152 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ECHDC3Q96DC8 303 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 TXNDC15Q96J42 360 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 RBM24Q9BX46 236 aaKnown RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 TAS2R9Q9NYW1 312 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 OAZ3Q9UMX2 235 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF541Q9H0D2 1346 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 CENPBD1B2RD01 187 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 TMEM233B4DJY2 109 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 LCATP04180 440 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 CKMT1AP12532 417 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF28P17035 718 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 GATMP50440 423 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 NSDHLQ15738 373 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 DPY19L1Q2PZI1 675 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 PXKQ7Z7A4 578 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 CCDC116Q8IYX3 515 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 C9orf43Q8TAL5 461 aaPredicted RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 SECISBP2Q96T21 854 aaKnown RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 MROQ9BYG7 248 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 E9PCH4 1651 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ATRNL1Q5VV63 1379 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 C1orf196B1AJZ1 125 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 DLGAP1O14490 977 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 CHEK1O14757 476 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 B4GALT4O60513 344 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 EDF1O60869 148 aaKnown RBP6.59□□□□□ -1.35
SYNE2-216ENST00000555002 SFRP5Q5T4F7 317 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 LEG1Q6P5S2 330 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 GSG1LQ6UXU4 331 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 MEX3BQ6ZN04 569 aaKnown RBP6.59□□□□□ -1.35
SYNE2-216ENST00000555002 LRRC55Q6ZSA7 311 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF695Q8IW36 515 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 MARVELD2Q8N4S9 558 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 KREMEN1Q96MU8 473 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 COG8Q96MW5 612 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 HRASLSQ9HDD0 168 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 TRBV2A0A0J9YWF9 115 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 ALOX15BO15296 676 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 SLC19A2O60779 497 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 UFM1P61960 85 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 FKBP1BP68106 108 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 ST3GAL3Q11203 375 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 TRIM61Q5EBN2 209 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 TPGS2Q68CL5 300 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 FCRLBQ6BAA4 426 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 OR4N5Q8IXE1 308 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 OR4K14Q8NGD5 310 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms